Lytechinus pictus (painted urchin): 129265877
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Entry
129265877 CDS
T09066
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129265877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129265877
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129265877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129265877
NCBI-ProteinID:
XP_054759769
LinkDB
All DBs
Position
7:complement(28045941..28054484)
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AA seq
181 aa
AA seq
DB search
MAAVYGPGDIKPNKALMDKATVTVTYKPKVGMAGVREKALERMIRNTCETVLLTTLFPRS
SVDIIIQEIQDAGALLACCINAACLAMINGGIPMKCTVAASCCMMSKDEDLVVDPTKEQA
KDADCILTAAIDSSSHNLITSSMHGSCTVEQYHKLMSVSQKACDKVFDFYREAMTRTLSK
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtttatgggcctggggatatcaaaccaaataaggctctcatggacaaggca
acagtaacagttacatacaaaccaaaagtaggaatggcaggtgtaagagagaaagccttg
gagaggatgatcaggaatacctgtgagacggtcctcttgaccacactcttcccacgttct
tctgttgatatcatcatccaggagatccaagatgcaggggctctgttagcatgttgcatc
aacgcagcttgcttggccatgatcaatggaggcatccccatgaaatgtactgtcgcagct
tcctgttgcatgatgagtaaagatgaagaccttgtggttgatccaacaaaggaacaggca
aaggatgctgattgcatattaacagcggccattgacagttcatcacataacctcatcaca
tctagcatgcatggcagctgcactgtggaacaatatcacaagctgatgtcagtgagccag
aaagcatgtgacaaggtatttgatttctaccgagaagcgatgacaaggacattatccaaa
ccttga
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