Lytechinus pictus (painted urchin): 129267173
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Entry
129267173 CDS
T09066
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03410
Base excision repair
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129267173
03410 Base excision repair
129267173
03420 Nucleotide excision repair
129267173
03430 Mismatch repair
129267173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129267173
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129267173
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129267173
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129267173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
AAA
AAA_22
Rad17
PTCB-BRCT
BRCT_2
RuvB_N
nSTAND3
AAA_17
AAA_18
AAA_5
RNA_helicase
AAA_14
AAA_33
AAA_16
Ribosomal_L16
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
129267173
NCBI-ProteinID:
XP_054760888
LinkDB
All DBs
Position
1:48124658..48148605
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AA seq
665 aa
AA seq
DB search
MSMDIRSFFGSPGRGKSASSSAKQSNGKGKRKHNDDDGDFVQSEKKQRHSAKSMKKSNII
YDSDSDDEPPQSKKSKTPVKSADSKTSKGPAKLPQPTPEKKKPTSVIDFFGSSPVQRSAK
KSTRKDQPIRNGGSKKPKLEKEEHDDDDFEATLRMMDEDKSPPKEDKKGKGKGLASKLAA
KVKAGSLVPETPDREKPKERPRSVETTIEDTPLSGRKQSRISPKDDKKASPEKRVTRSTP
TKATPSRPPHIKSTTKAKMEISSPPKKKEEVTTSPPAGEGEKKRGNNAGYRSYLNREGPR
SLGSREEPKGADGCLSGLTFVLTGVIECFDKDQIKAMIEQHGGRLTGSISKKTNYLVIGR
EPGESKVAKAQEFRTKQIQEEELYDLIESRPGKGGSKVKDQQPVKKQREAQPERKISKPD
TPISKSSPKDITLKKEPSSSSFYSKSSSSSSSLPSSTSQSSKPASGGDKSAAGNLMWVDK
YKPVHTKNIIGQQGDKSNAKKLLNWLRRWNDNNYGNNKEKAKFSRDDGYAFKAALLSGPP
GVGKTTTATLVCQELGFSYIEQNASDSRGKKSLQGGIAESLDNQSISDMFKKGCGKKTTD
EAYKHCLIMDEVDGVAGNEDRGGIQVQARYGISEETWPPSASPVPLMKSAQTILFFLATS
DSRWR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggacattcgatccttcttcggcagcccgggaagaggtaaatctgcatccagt
tcagctaagcagagcaatggcaagggtaagagaaagcacaatgacgatgacggagacttc
gtgcagagtgagaagaagcaacgccactcggccaaatcaatgaagaaatccaacatcatt
tatgactctgactcagacgacgaaccaccccaatccaaaaagtcaaagacccctgtgaag
tcagccgattccaagaccagtaagggacctgccaagctgcctcagccgaccccagagaag
aagaaacccacctcggtgatagatttctttgggagctcaccggtccagaggtctgcaaag
aaatccacaaggaaagatcagccaatccggaatggaggatccaagaaaccaaagctcgag
aaggaggagcatgatgacgatgactttgaagccaccctcagaatgatggatgaagataag
tcacctcctaaagaagacaaaaaaggtaagggtaaagggcttgcaagcaaattggcagct
aaggtgaaggcgggtagcctcgttccagaaacaccggacagagagaaacccaaagagagg
ccaagatctgtggaaacaacaattgaggatactccattaagtggcagaaagcagagcaga
atatcgccaaaggacgacaaaaaagcaagtccggagaagagagtgacccggtcgacccca
accaaagccacacccagtaggccgccacatataaagtctaccaccaaagcaaaaatggaa
atttcatcccctcctaagaagaaggaagaggtcacaaccagccccccagctggtgagggg
gagaagaagaggggtaataatgctggctacaggagctatctgaatcgggaggggccgagg
tcgttggggtcaagagaagagccaaagggtgcggatggctgtttgtcgggtttaaccttt
gtgctcactggagtaatagaatgctttgacaaagatcagatcaaggcgatgatcgagcag
cacggcggaagactcaccggtagcatcagcaagaagacaaactatctcgtgattggccga
gaaccgggagagtccaaggttgcaaaggctcaagagttcagaaccaagcagatccaagag
gaagaactctatgacctgatagaatccagaccggggaaaggagggtcaaaggtcaaagat
cagcagcctgtaaagaagcaacgagaagcacagcctgagagaaagataagcaaacctgac
acacccatttctaaatcatcacccaaggatatcacacttaagaaggaaccatcatcatca
tccttctactcaaagtcatcatcctcatcatcctcgttgccgtctagtactagtcaaagt
tcaaagccagcatcagggggtgacaaatcagcagccgggaacctgatgtgggttgacaag
tacaagccggtccatacgaagaacatcatcggacaacagggagataagagcaacgccaag
aaactcctcaactggctcaggaggtggaatgataataactatggcaacaacaaagaaaaa
gctaaattcagccgggatgatggatatgcattcaaggcagctctcctgtctggccctcca
ggtgtgggtaaaacaacaacagcaactctggtttgccaggaacttggcttttcttacatt
gaacaaaatgcgagtgattcaagaggaaagaagtccttacagggaggtattgctgagtcg
cttgacaaccagtctatctctgacatgttcaagaagggttgtggaaagaagacgacggac
gaggcctacaagcattgtcttatcatggatgaggtggatggtgtggcggggaacgaggac
agaggaggtattcaggtacaagctagatatggaatttctgaagagacttggccaccttct
gccagtcctgttcctctcatgaagtctgctcagacaatcctattttttcttgctacttct
gatagcaggtggaggtaa
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