Lytechinus pictus (painted urchin): 129267923
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Entry
129267923 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03410
Base excision repair
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
lpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129267923
03410 Base excision repair
129267923
03420 Nucleotide excision repair
129267923
03430 Mismatch repair
129267923
03440 Homologous recombination
129267923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129267923
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129267923
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129267923
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129267923
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129267923
MMR (mismatch excision repair)
DNA polymerase delta complex
129267923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
RNR-II_ins_dom
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
129267923
NCBI-ProteinID:
XP_054761511
LinkDB
All DBs
Position
9:34380980..34411458
Genome browser
AA seq
1050 aa
AA seq
DB search
MDSKRKPGGSARGPGPQSKKARVQDFEDQDPSVFEEELALMEQIEQEIYPPCAALAPGAN
LQRQQSTCRHPKWPRPPLAPIDPAKDSIVFQQIDLEHYIGSHIQGMPGATSGPTPIIRMF
GVTDAGNSVMCHVHGFTPYFYIPAPQNFTPEHCSKFRVGLNDAVLADMRSNKDNLTQAVL
AVDVMQKENVYGYHGNKMMPFLKITVAYPKLIAPARRILEAGLSIPPYPHRGYQTXTSNI
DFEIRFMVDADVVGCNWIEVPAGSYRVRSSSGHTPVSASQIEIDVAWDRFISHPADGQWQ
KVAPFRIMSFDIECAGRKGIFPEAEKDPIIQIANMVIRQGERDPFIRNIFTLNTCAPIVG
SQVMSFKTEHEMLQAWADFVKEVDPDILTGYNIQNFDIPYLINRAAALRLARFPFLGRLK
NTKSMIRDVSFQSKQLGKRENKVVNMEGRVQFDLLQVLVRDYKLRSYRLNAVSYHFLQEQ
KEDVQHSIITDLQNGNEQTRRRLAVYCLKDAMLPLRLLAKLMSVINYMEMARVTGVPLTY
LLSRGQQIKVVSQLLRKAKEQDLVMPAHKVVTGEDYVGGYVLDPIRGYYDCPIATLDFSS
LYPSIMQAHNLCYTTLLSPSMKENLAPDQYIKTPTGNYFVKKAVRRGILPEILEDLLTAR
KRAKADLKKETDPLRKKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTAFGRMM
IDKTRQLVETKYTVENGYKTTAKVIYGDTDSVMVKFGVNTVAESMELGKDAAMWISDEFP
SPIKLEFEKVYFPYLLINKKRYAGLYFTRPDTYDKMDYRKWYCLQASSCGAGREKGEECA
CKQAHVELATRMKKRDPGSAPALGDRVPYVIIAKAKGAAAYEKSEDPIYVLENNIPIDTT
YYLENQLKGPLLRIFEPVIGENKVESVLLKGEHTRAKTQVTSKIGGLMAFAKKRSKCLGC
KMGLDQDGIALCKFCKANESSIYQKEISQLAALEEKFGRLWTQCQRCQGSLHEDILCTSR
DCPIFYMRKKVQKDLADQDALIKRFGNPCW
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaacgcaaaccagggggctctgctcgagggcctggaccccagtcaaagaag
gccagggtccaggacttcgaagaccaggacccatcggtattcgaggaagagctggccttg
atggagcagatcgaacaagaaatttacccaccttgtgctgcacttgccccaggtgccaat
ttgcagagacagcagagtacatgtcggcatcctaaatggcctcgccctccgctggctccg
atcgaccccgcgaaagactcgatcgtattccaacagattgatctggagcattatattggc
tcgcacattcagggcatgcccggtgcaacgtcggggcccaccccgatcatcaggatgttc
ggtgtcaccgacgcaggcaacagtgtcatgtgccacgtccacggattcacgccctacttc
tacatccccgccccgcagaatttcacgccagaacactgctcgaagttcagggttggtctg
aatgacgcggtcttggccgatatgaggtctaacaaggacaacctgacgcaagctgtctta
gcagttgatgtcatgcagaaagaaaatgtgtatggttaccatggaaacaagatgatgcct
ttcttgaagatcacagttgcctacccgaagctgatagcccctgccaggaggatcctggaa
gcaggactatcgatcccgccttacccgcacagggggtaccagactntcacgagcaacatt
gactttgagatcagatttatggttgatgccgatgttgtcggttgcaattggatcgaagtg
ccagctgggagctatcgtgtgcgatcgtcctcggggcacactcctgtttcggcgtcacag
atcgagatcgatgttgcgtgggaccgcttcatcagccatcctgccgacggccagtggcag
aaggtggcacccttcaggataatgagttttgatatcgaatgtgcagggcggaaaggaatt
ttcccagaagcagagaaagaccccattatccagattgccaacatggtgatccggcaggga
gagagggatcccttcatcagaaacatctttacgctcaatacttgcgcccctatcgttggc
tcccaggtgatgtcgttcaagacggaacacgagatgctacaggcatgggctgacttcgtt
aaagaagtagaccccgatatcttgacggggtacaacatccagaactttgacatcccctat
ctcatcaaccgcgcagcggccctcaggcttgcgcgcttcccgttcctcggacgcctcaag
aacacgaagagcatgatcagggatgtctccttccagtccaagcagctcggcaagagagag
aacaaggtcgtcaacatggaaggtcgtgtgcagttcgatcttctacaggttcttgtgagg
gactataaactcagatcctatcgtctaaacgcagtcagttaccacttcctccaagaacag
aaggaagacgttcaacattccatcatcacagatcttcaaaatggcaatgagcaaaccaga
agacggttggccgtttactgtctgaaagacgccatgctcccgctgcgtctcctcgccaaa
ctcatgtcggtcatcaactacatggagatggcgagggtgacgggcgtgcctctcacctac
ctgctctctcgagggcagcagattaaagttgtctcgcagcttctccgaaaggccaaggaa
caagaccttgtgatgcctgcgcacaaagtagttacaggagaggattacgtcggtggctac
gtcctggatccaatcagagggtactatgactgtccgattgcaacgctggatttctcttcg
ctatacccatccattatgcaggcacacaatctctgctatacaactctcttatcaccctca
atgaaagaaaatcttgcacctgatcagtacatcaagacgccgacggggaactacttcgtc
aagaaggcggtcagacgaggcattctcccggagatccttgaagatcttcttacagcaagg
aagagagcaaaggcagatctgaagaaggaaacggacccgctgcggaagaaggtgctggac
ggccgacagctcgccctgaaggtcagcgcgaactccgtctacggattcaccggagcccag
gtcgggaagctgccgtgcctggagatctcccagagcgtgacggcgttcgggaggatgatg
atcgacaagacgaggcagctggtggaaactaagtacacagttgagaatgggtacaagacc
actgcgaaggttatctatggagatactgactcggtaatggtcaagttcggtgttaatacg
gtcgctgagagtatggagctgggcaaagatgctgcaatgtggatctcagacgagtttcct
tcgcccatcaaactggaatttgaaaaggtctactttccgtacctgttgatcaacaagaag
cgatacgcaggtctctacttcacgagacccgacacctacgacaagatggactacaggaaa
tggtattgcttgcaagcaagctcatgtggagctggtcgcgagaaaggagaggaatgtgct
tgcaagcaggctcatgtggagctggccacaaggatgaagaaaagagatccaggaagtgcg
ccagctctaggtgaccgcgttccgtacgtcatcatcgctaaggctaaaggggccgctgca
tatgagaagtcagaggatccaatctatgtattagagaataacattccgattgacaccaca
tattacctggagaaccagctgaaaggacctctgcttaggatctttgagccagtcatcggg
gagaataaagtagaatcagtactattgaagggggagcacaccagggcgaagacccaggtc
acctcaaagatcggcggtctcatggcctttgctaagaagagaagcaagtgcctcggatgc
aagatgggtctggaccaagatggcatcgccctctgcaagttctgcaaggccaacgagtct
tccatctaccagaaggagatcagtcagttggcagccctggaggagaagtttggacgtctg
tggacgcaatgtcagcgctgccaggggagtctgcatgaagatatcttgtgtacgagtcgt
gactgtccaatcttctacatgcgcaagaaggttcagaaggaccttgccgaccaggacgct
ctcatcaagagattcggcaacccgtgctggtga
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integrated database retrieval system
