Lytechinus pictus (painted urchin): 129268392
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Entry
129268392 CDS
T09066
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03410
Base excision repair
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
lpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129268392
03410 Base excision repair
129268392
03420 Nucleotide excision repair
129268392
03430 Mismatch repair
129268392
03440 Homologous recombination
129268392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129268392
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129268392
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129268392
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129268392
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129268392
MMR (mismatch excision repair)
DNA polymerase delta complex
129268392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
RNR-II_ins_dom
DNA_pol_B_exo2
DUF7539
Motif
Other DBs
NCBI-GeneID:
129268392
NCBI-ProteinID:
XP_054761921
LinkDB
All DBs
Position
9:complement(34098694..34132112)
Genome browser
AA seq
1106 aa
AA seq
DB search
MDSKRKPGGSARGPGPQSKKARVQDFEDQDPSVFEEELALMEQIESEMDSQGTNGSVGGP
GPSVNNGANLQRQQSTCRHPKWPRPPLAPIDPAKDSIVFQQIDLEHYIGSHIQGMPGATS
GPTPIIRMFGVTDAGNSVMCHVHGFTPYFYIPAPQNFTPEHCSKFRVGLNDAVLADMRSN
KDNLTQAVLAVDVLQKENVYGYHGNKMMPFLKITVAYPKLIAPARRILEAGLSIPPYPHR
GYQTYESNIDFEIRFMVDADVVGCNWIEVPAGSYRVRSSSGHTPVSASQIEIDVAWDRFI
SHPADGQWQKVAPFRIMSFDIECAGRKGIFPEAEKDPIIQIANMVIRQGEKDPFIRNIFT
LNTCAPIVGSQVMSFKTEHEMLQAWADFVKEVDPDILTGYNIQNFDIPYLINRAAALRLA
RFPFLGRLKNTKSVIRDVSFQSKQLGKRENKVVNMEGRVQFDLLQVLVRDYKLRSYRLNA
VSYHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAMLPLRLLAKLMSVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRKAKEQDLVMPAHKVVTGEDYVGGYVLDPIRGYYDC
PIATLDFSSLYPSIMQAHNLCYTTLLSPSMKENLAPDQYIKTPTGNYFVKKAVRRGILPE
ILEDLLTARKRAKADLKKETDPLRKKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQ
SVTAFGRMMIDKTRQLVETKYTVENGYKTTAKVIYGDTDSVMVKFGVTTVAESMELGKDA
AMWISDEFPSPIKLEFEKVYFPYLLINKKRYAGLYFTRPDTYDKMDCKGIETVRRDSCPL
VSNVLNNVLQKILIERDPTGALDHTKQTISDLLCNRIDISQLVITKELTKTGEEYAGRQA
HVELAARMKKRDPGSAPALGDRVPYVIIAKAKGAAAYEKSEDPIYVLENNIPIDTTYYLE
NQLKGPLLRIFEPVIGENKVESVLLKGEHTRAKTQVTSKIGGLMAFAKKRSKCLGCKMGL
DQDGIALCKFCKANESSIYQKEISQLAALEEKFGRLWTQCQRCQGSLHEDILCTSRDCPI
FYMRKKVQKDLADQDALIKRFGNPCW
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaacgcaaaccagggggctctgctcgagggcctggaccccagtcaaagaag
gccagggtccaggacttcgaagaccaggacccatcggtattcgaggaagagctggccttg
atggagcagatcgagtctgagatggattctcaggggaccaatggatctgttggaggacca
ggaccatcagttaacaatggtgccaatttgcagagacagcagagtacatgtcggcatcct
aaatggcctcgccctccgctggctccgatcgaccccgcgaaagactcgatcgtattccaa
cagattgatctggagcattatattggctcgcacattcagggcatgcctggtgcaacgtcg
gggcccaccccgatcatcaggatgttcggtgtcaccgacgcaggcaacagtgtcatgtgc
cacgtccacggattcacgccctacttctacatccccgccccgcagaatttcacgccggaa
cactgctcgaagttcagggttggtctgaatgacgcggtcttggccgatatgaggtctaac
aaggacaacctgacgcaagctgtcttagcagttgatgtcttgcagaaagaaaatgtgtat
ggttaccatggaaacaagatgatgcctttcttgaagatcacagttgcctacccgaagctg
atagcccctgccagaaggatcctggaagcgggactatcgatcccgccttacccgcacagg
gggtaccagacttacgagagcaacattgactttgagatcagatttatggttgatgccgat
gttgtcggttgcaattggatcgaggtgccagctgggagctatcgtgtgcgatcgtcctcg
gggcatactcctgtttcggcgtcacagatcgagatcgatgttgcgtgggaccgctttatc
agccatcctgccgacggccagtggcagaaggtggcacccttcaggataatgagttttgat
atcgaatgtgcagggcggaaaggaattttcccagaagcagagaaagaccccattatccag
attgccaacatggtgatccggcagggagagaaagatcccttcatcagaaacatctttacg
ctcaatacttgcgcccctatcgttggctcccaggtgatgtcgttcaagacggaacacgag
atgctacaggcatgggctgactttgttaaagaagtagaccccgatatcttgacggggtac
aacatccagaactttgacatcccctatctcatcaaccgcgcagcggccctcaggcttgcg
cgcttcccgttcctcggacgcctcaagaacacgaagagcgtgatcagggacgtgtccttc
cagtccaagcagctcggcaagagagagaacaaggtcgtcaacatggaaggtcgtgtgcag
ttcgatcttctacaggttcttgtgagagactataaactcagatcctatcgcctaaacgca
gtcagttaccacttcctccaagaacagaaggaggacgttcaacattccatcatcacagat
cttcaaaatggcaatgagcaaacgagaagacgattggctgtctactgtctgaaagacgcc
atgctcccgctgcgtctcctcgccaaactcatgtcggtcatcaactacatggagatggcc
agagtgacgggcgtgcccctcacctacctgctctctagagggcagcagattaaagttgtc
tcgcagcttctccgaaaggccaaggaacaagaccttgtgatgcctgcgcacaaagtagtg
acaggagaggattacgtcggtggctacgtcctggatccaatcagagggtactatgattgt
ccgattgcgacgctggatttctcttcactatatccatccattatgcaggcacacaatctc
tgctacacaactctcttatcaccctcaatgaaagaaaatcttgcacctgatcagtacatt
aagacgccgacggggaactacttcgtcaagaaggcggtcagacgagggattctcccggag
atccttgaagatcttcttacagcaaggaagagagcaaaggctgatttgaagaaagaaacg
gacccactgcggaagaaggtgctggacggccgacagctcgccctgaaggtcagcgcgaac
tccgtctacggattcaccggagcccaggtcgggaagctgccgtgcctggagatctcccag
agcgtgacggcgttcgggaggatgatgatcgacaagacgaggcagctggtggaaactaag
tacacagttgagaatgggtacaagaccactgcgaaggttatctatggagatactgactca
gtaatggtcaagttcggtgttactacggtcgctgagagtatggagctgggcaaagatgct
gcaatgtggatctcagacgagtttccttcgcccatcaaactggaatttgaaaaggtctac
tttccgtacctgttgatcaacaagaagcgatacgcaggtctctacttcacgagacccgac
acctatgacaagatggactgcaagggaatcgagacggtccgtagggacagctgccctcta
gtgtccaatgtcttaaacaacgtccttcaaaagatcctcattgaaagggaccccactgga
gccttggaccacacgaagcagaccatctctgatctcctctgtaaccgtatcgacatctca
cagcttgtaataaccaaagaactcaccaagacgggagaggagtacgcaggcaggcaggct
cacgtcgagctggccgcaaggatgaagaaaagagacccgggaagtgcgccagctctaggt
gaccgcgttccgtacgtcatcatcgccaaggctaaaggggccgctgcatatgagaagtca
gaggatccaatctatgtattagagaataacattccaattgacaccacatattacctggag
aaccagctgaaaggacctctgcttaggatctttgagccagtcatcggggagaataaagta
gaatcagtactattgaagggggagcacacaagggcgaagacccaggtcacctcaaagatc
ggtggtctcatggcctttgctaagaagagaagcaagtgcctcgggtgtaagatgggtctg
gaccaagatggcatcgccctctgcaagttctgcaaggccaacgagtcttccatctaccag
aaggagatcagtcagttggcagccctggaggagaagtttggacgtctgtggacgcaatgt
cagcgctgccaggggagtctgcatgaagacatcctgtgtacgagtcgtgactgtccgatc
ttctacatgcgcaagaaggttcagaaggaccttgccgaccaggacgctctcatcaagaga
ttcggcaacccatgctggtga
DBGET
integrated database retrieval system
