Lytechinus pictus (painted urchin): 129268993
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Entry
129268993 CDS
T09066
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129268993
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129268993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_GCN1
TOR1L1_N
HEAT_GCN1_C
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_GCN1_C_2
HEAT_2
TPR_Trm732_C
HEAT_EZ
ResIII
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
129268993
NCBI-ProteinID:
XP_054762418
LinkDB
All DBs
Position
10:complement(6140386..6191918)
Genome browser
AA seq
1797 aa
AA seq
DB search
MATRLDRLFLLLDTGSTPVTRRAAAQQLGEVQKLHPHDLHILLSKVHTYLKSGSWETRIA
AGQAVEAIAKNVPQTCHPIDPIKPEPGVDGPPSINIPSVQSQRDATRLEFSKFDVARVLD
QGASLLGSAGSEYELEVDVGGDPKERLAKQKRLLQKKLGLDVGLIGVETDDLFNDDDLST
FPQTPTTSNLLKPPASAADIVAQEMANLGPGLSSREKNRAKRKAKLLAKQRSKDGLEGTS
MDKEEPSKKRLRAGSTFGSQGSMSFDKASVDSVDNTIFLEEPGDWSFTSFCEQLTNDLFH
QSWEIRHGAATGLREVLKAHGQSAGKSADSSVDQVVLNQMFLEDMSLRLLCVLALDRFGD
FVSDEVVAPVRETCAQALGVVLHHMTPEAVHGVCTILLQLLAQNQWEVRHGGLLGLKYLL
AVRKEMTEVLLPAVLPSIIQGLQDVDDDVRAVSAAALLPVTQVLIKTSPQQVMQILHTLW
ETLVELDDLTASTNSIMNLLASLLSNPSVCIQSSLSQPLGVMVQRLWPFMRHNIGSVRRA
VLDTLHTLLCTENPQMPVAAWIAPILTDMLRHVYQRCILETNKDILELVKKVWDALLQRT
PFEFIVQAAFPWVSTWLCLAMQPARVPIDPQMLIEAKHKPKETSKSPGKSSWKSQQTIRE
DDVEYIGGDISMTASQTDQEEAVLLARATAARLLGRLAPYLTLTIAPSQDGGLDPFCQVL
QFHLNTKNSLQRMQVAMVIEEWARAGLQDCKCPDGLKSTLMEVLSSTVYFDEVTNPFMKL
QLECKSLVVAWRAMRPDILQTSFPSAFTVDQARSLYDSVQQHLSQTIGGSDAHQDLQSKA
RQVLASVHEINEQQQKLSIRTQSCVTGALVSLQALPDKLNPLIRPLMDAVKKEESPIMQK
RAAGNLARLLELCSSRQPCPNPKIIKNLCTSLCSDPSITPPASQPLRSSTNDPPLNTLAV
PMPGPGGSRSSSPLTVGGGEGSSSQTIVPCDKLHGVLTLSKQQQQAVLTAASRRAAFTKS
RSRDSSMPDIALSLGVDPGGESSETMKQAKIQRRGSEMALTTITSHFGSRLLESLGKVWE
SMTGQLMEQIKPGKFDRTFHLDKDHQAQDLVTSMQVFETLAPVLHSCYHPKLEGLLPHFI
TCLEHPYTSVRHMSSRCLGMMCKVITMATMNRLLMEVVPMLGAQEDEVKREGAVESLACV
IDQLGMDIVPYIVLLVVPLLGRMSDQVDSIRLTATQCFATLIRLMPLEAGIPDPPAMTDA
LVEQKNRERRFLEQLLDSSKLDNYKVPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDD
MGLGKTLQSICIMAGDHHHRNAAYKKAKSADCVPMPSIVVCPPTLTGHWVYEVQKFCSTQ
YLNPLHYTGPPTERTRLRSKVKKHNLVVVSYDIVRNDIDFFRTIDWNYCILDEGHIIKNG
RTKLAKAIKQLNACHRLILSGTPIQNNVLELWSLFDFLLPGFLGTEKQFIARFAKPILQS
RDAKSSSKEQEAGALAMEALHRQVLPFLLRRLKEDVLDDLPPKIIQDYYCELSPLQVQLY
EDFARSRAKMGVVETISSEAEEKKPKAPAAATGHIFQALQYLRKVCNHPLLVLNNKHPQY
EAVTKQLKEQNSSLHDINHAPKLTALKQLLLDCGIGVDALGSNPGSELTQSVVGQHRVLL
FCQLKGMLDIVEKDLLRSQMPSVAYLRLDGSVPASQRHDLVHRFNNDPSIDILLLTTHVG
GLGLNLTGADTVIFVEHDWNPTKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMG
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaggcttgacaggctgttcctactgctagatacagggtcaacaccagtcact
agaagggccgctgcacaacagctgggagaggttcagaagttgcatcctcatgatcttcat
atcctactctctaaggttcatacatatttgaagagtggatcttgggagacgaggattgct
gccgggcaagccgtggaagccattgctaagaatgtaccacaaacttgtcatccaattgat
cctatcaaaccagaaccaggagtagacggtccacccagtatcaacattccctcagtgcag
tcacagcgcgatgctactcgtctggagttctcaaagtttgacgttgctagggtcttggac
cagggcgcctccctccttggatcggcaggatcagagtacgagcttgaagtagatgttggt
ggggaccctaaagaaaggttagccaaacagaagaggctactccagaagaagcttggtcta
gatgttggtcttatcggcgtggaaacagatgacctcttcaatgatgatgacctgagtacc
tttcctcagactccaacaacctccaatctcttgaaaccaccagcaagtgcagctgacatt
gttgcccaggagatggctaatcttggtccagggctgagttctagggagaagaacagggct
aagagaaaggctaagctgctggccaaacagaggtccaaagatggcctggaaggaacaagc
atggacaaggaggagccgtccaagaaacgattgagagccgggagcacctttggtagtcaa
ggcagtatgtccttcgacaaggcatcggtagacagcgtggataataccattttcttggaa
gagcctggagactggtccttcacatcgttctgtgagcagctgacgaatgacctcttccac
caatcttgggagatcaggcatggggcagctacaggcctgagagaggtgctcaaggcccat
gggcagagtgctggaaagtcagcggactcatctgtagaccaggttgttctcaatcagatg
ttccttgaagatatgtcacttcgtctgctgtgcgtgcttgccctggatcgatttggagac
tttgtatctgatgaggtggtagcaccagtcagggaaacatgtgcccaagctttgggggtg
gtcctacatcatatgacccctgaggccgtgcacggagtgtgtacgatcctactccagctc
ctagcccagaaccagtgggaggtccgtcacggtggactgctgggactcaagtatctgcta
gcagtcaggaaggaaatgacggaagtcctccttcctgctgtactgccctctatcatccaa
ggacttcaggatgtggatgatgacgtgagggcagtctctgctgcggccttgctacccgtc
actcaagtgcttattaagactagccctcaacaggtgatgcagatcttgcacacactgtgg
gaaaccctagtcgaacttgacgacctgacggcgtccaccaacagcatcatgaacctgctg
gcttccctcctctccaacccttcggtctgcatccagtcgagtctcagtcaacccctggga
gtcatggtccagagactctggcctttcatgaggcacaacataggatctgtccggagggca
gtactggacacccttcacacgctactctgcacagagaacccacagatgcctgtagctgct
tggattgctcctatcttgactgacatgttgagacatgtctatcaaaggtgcatcttggag
accaataaagacatcctggagcttgtcaagaaggtctgggatgcccttctgcagagaacg
ccgtttgaattcatcgtccaggcagcctttccgtgggtgagcacctggctatgtctagct
atgcaacctgcaagagtacccatagatccccagatgctcattgaagcgaagcataaaccc
aaggaaaccagcaagtcacctgggaagtcttcatggaaaagccagcagacgatacgagag
gatgacgttgagtacatcggaggggacatctccatgaccgcatctcagaccgaccaggaa
gaagcagtcttgcttgcaagggcaacggcagctagactccttggtcgtttagccccctac
ctaacccttaccatcgctcccagtcaagatggcggactggacccattctgtcaggtcctt
cagtttcatctcaacacaaagaattcattacagcggatgcaggttgccatggtaattgag
gagtgggctagagcaggactacaggattgcaaatgccctgatggcctcaagtcgaccctg
atggaggtcttatcaagtactgtctattttgatgaggttacaaaccctttcatgaaacta
cagctggaatgtaagagccttgttgtggcctggagagcaatgaggcctgacatcttgcaa
accagtttcccaagtgcctttactgttgaccaagcgaggtcattgtacgactccgttcag
cagcatctatctcagacgattggtggaagcgatgcccaccaagatctccagagtaaagca
agacaggtgctggcatctgtccatgaaatcaatgaacagcaacaaaaactcagtatcaga
actcagtcttgtgtaacaggagcattagtctctcttcaagccttacctgataaattgaat
ccactcatcaggcctctgatggatgcagtcaaaaaggaggagagtccaattatgcagaaa
agagctgcagggaacttggcccgtctcctggagctttgttcatcccgccaaccttgccct
aacccgaagatcatcaagaacctctgtaccagtctctgttccgacccatccatcacccca
ccggcctcccaacctctacgctcctccaccaacgatcccccattgaacacccttgccgtg
cccatgcctggcccaggggggtccaggtcgtcatcgcccctgacggttgggggcggggag
ggtagcagttcacagacgatcgtcccgtgcgataagcttcacggtgtccttacactatcc
aagcaacaacagcaagcagtattgacagctgcgagcagacgagcagccttcaccaagtct
cgcagccgtgacagcagcatgcctgacatagcactgagcctgggcgtcgaccctggtggg
gaatcatcagagaccatgaagcaggctaagatccagaggagggggtcggagatggccctg
actaccatcacgtcgcacttcggcagcaggctgctggagtccttaggcaaggtctgggag
tccatgacaggtcagctcatggagcaaatcaaaccaggaaaatttgatcgaacgtttcac
ttggataaggaccatcaagcccaagatctcgtcacctctatgcaagtctttgaaactctt
gctcctgtattacattcctgttatcatcccaagttagaggggctgctgccccatttcatc
acgtgcctggagcacccttacacgtccgttcgtcacatgtcatcccgttgcttgggaatg
atgtgtaaggtcattaccatggcaaccatgaaccgtctccttatggaggtcgttcccatg
ttaggagcccaggaggatgaggtcaagcgagaaggagcggttgaatcattagcttgtgtc
attgatcagcttggcatggacatcgtcccctacatcgtcctcctggtcgtacctctactg
ggcaggatgagtgaccaggtggacagtatcaggctgaccgctacccaatgcttcgccaca
ctgatcaggcttatgccgcttgaggctggtatccctgacccacccgccatgacagacgcc
ctcgttgagcagaagaacagggagagacgtttcctggaacagctcctagacagctccaag
ctggacaactacaaggtccccgttcctatcaaggctgaactcaggaagtaccaacaggat
ggtgtgaactggttagcgttcctcaacaagtacaagctccatggcatcctgtgcgatgac
atgggtctggggaaaaccctccagtctatctgcatcatggccggcgaccaccaccaccgg
aacgccgcctacaagaaggccaagagcgccgactgcgtgcccatgccgtccatagtggtg
tgtcccccgactctgaccggccactgggtctacgaggttcagaagttctgctccacccag
tatctgaatcccctgcactacactggtccaccaactgaacgtacaaggttgaggagcaaa
gtcaagaagcacaatcttgtggttgtctcttatgatatcgtcaggaatgatatcgatttc
tttaggacaatagattggaattattgcatccttgatgagggtcatataatcaagaatgga
cggaccaagttagccaaggccatcaagcagctcaatgcttgtcatagactcatcctatct
gggacacctatacagaataacgtattggagctctggtccctgtttgatttcctgctgcct
gggttcctgggaacggagaaacagttcatagcaaggtttgccaaacccatcctccaaagc
cgggatgccaagagttcttccaaagaacaagaagctggagctctggcgatggaggccctt
catcgtcaggtcctaccgtttctcttgaggagactcaaagaagatgtccttgatgacctt
ccacccaagatcatccaggattactactgcgagctcagtccactacaggtacaactgtat
gaggactttgctaggtctagggccaagatgggagtggtggaaaccatctcttccgaggct
gaggagaagaaacccaaagcacctgctgctgctactggacatatattccaggcattgcag
tatctacgtaaggtatgcaaccatcctctactcgttctcaacaacaaacatccacagtat
gaagcagtaaccaagcaactgaaagaacagaactcatctctgcacgacatcaaccatgct
ccaaaactaactgccctaaagcaactgttgttagattgtggtatcggtgtggatgctcta
ggatctaacccaggctctgagttgacccagtctgtggttggccagcatcgagtgcttctc
ttctgtcaactcaaaggaatgctggacatcgtagagaaagaccttctcagatctcagatg
ccctcagtagcatacctcagattagatgggagtgtacctgctagccaaagacatgatctt
gttcacagatttaacaatgatccatctattgatattcttctgttgaccactcatgtcggt
ggtctggggctgaacttgaccggagcagacacggtcatctttgtagaacatgactggaat
cccaccaaagacttgcaggcaatggacagagctcataggataggacagaaaaaggtggtc
aacgtctaccgtcttatcactagagggactcttgaggagaagatcatggggtaa
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integrated database retrieval system
