Lytechinus pictus (painted urchin): 129269004
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Entry
129269004 CDS
T09066
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129269004
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129269004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
HEAT_EZ
ResIII
Motif
Other DBs
NCBI-GeneID:
129269004
NCBI-ProteinID:
XP_054762431
LinkDB
All DBs
Position
10:6728200..6780802
Genome browser
AA seq
1797 aa
AA seq
DB search
MATRLDRLFLLLDTGSTPVTRRAAAQQLGEVQKLHPHDLHILLSKVHTYLKSGSWETRIA
AGQAVGSRIERIPQTCHPIDPIKPEPGVDGPPSINIPSVQSQRDATRLEFSKFDVTRVLD
QGASLLGSAGSEYELEVDVGGDPKERLAKQKRLLQKKLGLDVGLIGVETDDLFNDDDLST
FPQTPTTSNLLKPPASAADIVAQEMASLSPGLSSREKNRAKRKAKLLAKQRSKDGLEGTS
MDKEEPSKKRLRAGSTFGSQGSMSFDKASVDSVDNTIFLEEPGDWSFTSFCEQLTNDLFH
QSWEIRHGAATGLREVLKAHGQSAGKSADSSVDQVVLNQMFLEDMSLRLLCVLALDRFGD
FVSDEVVAPVRETCAQALGVVLHHMTPEAVHGVCTILLQLLAQNQWEVRHGGLLGLKYLL
AVRKEMTEVLLPAVLPSIIQGLQDVDDDVRAVSAAALLPVTQVLIKTSPQQVMQILHTLW
ETLVELDDLTASTNSIMILLASLLSNPSVCIQSSLSQPLGVMVQRLWPFMRHNIGSVRRA
VLDTLHTLLCTENPQMPVAAWIAPILTDMLRHVYQRCILETNKDILELVKKVWDALLQRT
PFEFIVQAAFPWVSTWLCLAMQPARVPIDPQMLIEAKHKPKETSKSPGKSSWKCQQTIRE
DDVEYIGGDISMTASQTDQEEAVLLARATAARLLGRLAPYLTLTIAPSQDGGLDPFCQVL
QFHLNTKNSLQRMQVAMVIEEWAKAGLQDCKCPDGLKSTLMEVLSSTVYFDEVTNPFMKL
QLECKSLVVAWRAMRPDILQTSFPSAFTVDQAKSLYDSVQQHLSQTIGGSDAHQDLQSKA
KQVLASVHEINEQQQKLSIRTQSCVTGALVSLQALPDKLNPLIRPLMDAVKKEESPIMQK
RAAGNLARLLELCSSRQPCPNPKIIKNLCTSLCSDPSITPPASQPLRSSTNDPPLNTLAV
PMPGPGGSRSSSPLTVGGGEGSSSQTIVPCDKLHGVLTLSKQQQQAVLTAASRRAAFTKS
RSRDSSMPDIALSLGVDPGGESSETMKQAKIQRRGSEMALTTITSHFGSRLLESLGKVWE
SMTGQLMEQIKPGKFDRTFHLDKDHQAQDLVTSMQVFETLAPVLHSCYHPKLEELLPHFI
TCLEHPYTSVRHMSSRCLGMMCKVITMATMNRLLMEVVPMLGAQEDEVKREGAVESLACV
IDQLGMDIVPYIVLLVVPLLGRMSDQVDSIRLTATQCFATLIRLMPLEAGIPDPPAMTDA
LVEQKNRERRFLEQLLDSSKLDNYKVPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDD
MGLGKTLQSICIMAGDHHHRNAAYKKAKSADCVPMPSIVVCPPTLTGHWVYEVQKFCSTQ
YLNPLHYTGPPTERTRLRSKVKKHNLVVVSYDIVRNDIDFFRTIDWNYCILDEGHIIKNG
RTKLAKAIKQLNACHRLILSGTPIQNNVLELWSLFDFLLPGFLGTEKQFIARFAKPILQS
RDAKSSSKEQEAGALAMEALHRQVLPFLLRRLKEDVLDDLPPKIIQDYYCELSPLQVQLY
EDFARSRAKMGVVETISSEAEEKKPKAPAAATGHIFQALQYLRKVCNHPLLVLNNKHPQY
EAVTKQLKEQNSSLHDINHAPKLTALKQLLLDCGIGVDALGSNPGSELTQSVVGQHRVLL
FCQLKGMLDIVEKDLLRSQMPSVAYLRLDGSVPASQRHDLVHRFNNDPSIDILLLTTHVG
GLGLNLTGADTVIFVEHDWNPTKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMG
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaggcttgacaggctgttcctactgctagatacagggtcaacaccagtcact
agaagggccgctgcacaacagctgggagaggttcagaagttgcatcctcatgatcttcat
atcctactctctaaggttcatacatatttgaagagtggatcttgggagacgaggatcgcg
gccgggcaagccgttggaagccgtattgaaagaataccacaaacttgtcatccaattgat
cctatcaaaccagaaccaggagtagacggtccacccagtatcaacattccctcagtgcag
tcacagcgcgatgctactcgtctggagttctcaaagtttgacgttactagggtcttggac
cagggcgcctccctccttggatcggcaggatcagagtacgagcttgaagtagatgttggt
ggggaccctaaagaaaggttggccaaacagaagaggcttctccagaagaagcttggtcta
gatgtcggtcttatcggcgtggaaacagatgacctcttcaatgatgatgacctgagtacc
tttcctcagactccaacaacctccaatctcttgaaaccaccagcaagtgcagctgacatt
gtagcccaggagatggctagtcttagtccagggctgagttctagggagaagaacagggct
aagagaaaggctaagctgctggccaaacagaggtccaaagatggcctggaaggaacaagt
atggacaaggaggagccgtctaagaaacgattgagagccgggagcacctttggtagtcaa
ggcagtatgtccttcgacaaggcatcggtagacagcgtggataataccattttcttggaa
gagcctggagactggtccttcacatcgttctgtgagcagctgactaatgacctcttccac
caatcttgggagatcaggcatggggcagctacaggcctgagagaggtgctcaaggcccat
gggcagagcgctggaaagtcggctgactcatctgtagaccaggttgttctcaaccagatg
ttccttgaagatatgtcacttcgtctgctgtgcgtgcttgctctggatcgatttggagac
tttgtatcagatgaggtggtagcaccagtcagggaaacctgtgcccaagctctgggggtg
gtcctacatcacatgaccccggaggccgtgcacggagtgtgtacgatcctactccagctc
ctagcccagaaccagtgggaggtccgtcacggtggactgctaggactcaagtatctgcta
gcagtcaggaaggaaatgacggaagtcctccttcctgctgtactgccctctatcatccaa
ggacttcaggatgtggatgatgacgtgagggcagtctccgctgcggccttgctacccgtc
actcaagtgcttattaagactagccctcaacaggtgatgcagatcttgcacacactgtgg
gaaaccctagtcgaacttgacgacctgacggcgtccaccaacagcatcatgatcctgctg
gcgtccctactctccaacccttcagtctgtatccagtccagtctcagccaacccctgggg
gtcatggtccagcggctctggcctttcatgaggcacaacataggatccgtccggagggcc
gtactggacacccttcacacgctactctgcacagagaacccacagatgcctgtagctgct
tggattgctcccatcttgactgacatgttgagacatgtctatcaaaggtgcatcttggag
accaataaagacatcctggagcttgtcaagaaggtctgggatgcccttctgcagagaacg
ccgtttgaattcatcgtccaggcagcctttccgtgggtgagcacctggctatgtctagct
atgcaacctgctagagtacccatagatccccagatgctcattgaagcaaagcataaaccc
aaggaaaccagcaagtcacctgggaagtcttcatggaaatgccagcagacgatacgagag
gatgacgtcgagtacatcggaggggacatctccatgacggcatctcagacggaccaggaa
gaagcagtcttgcttgcaagggcaacggcagcaagactccttggtcgtttagccccctac
ctaacccttaccatcgctcccagccaagatggcggactggacccattctgtcaggtcctt
cagtttcatctcaacaccaagaattccttacagcggatgcaggttgccatggtaattgag
gagtgggctaaagcaggactacaggactgcaaatgccctgatggcctgaagtcgaccctg
atggaggttttatcaagtactgtctattttgatgaggtgacaaaccctttcatgaaatta
cagctggaatgtaagagccttgttgtggcctggagagcaatgaggcctgacatcttgcaa
accagttttccaagtgcctttactgttgaccaggccaagtcattgtacgactctgttcag
cagcatctctctcagacgattggtggaagcgatgcccaccaagatctccagagtaaagca
aaacaggtgctggcatctgtccatgaaatcaatgaacagcaacaaaaactcagtatcaga
actcagtcttgtgtaacaggagcattagtctctcttcaagccttacctgataaattgaat
ccactcatcaggcctctgatggatgctgtcaaaaaagaggagagtccaattatgcagaaa
agagctgcaggaaacttggcccgtctcctggagctttgttcgtcccgccaaccttgcccc
aaccctaagatcatcaagaacctctgcaccagtctctgctccgacccatccatcacccca
ccggcctcccaacctctacgctcctcaaccaacgatcccccattgaacacccttgccgtg
cccatgcctggcccaggggggtccaggtcgtcatcgcccctgacagtcgggggcggggag
ggtagcagttcacagacgatcgtcccctgcgataagcttcatggtgtccttacactgtcc
aagcaacaacagcaagcagtattgacagctgcgagcagacgagcagccttcaccaagtct
cgcagccgtgacagcagcatgcctgacatagcactgagcctgggcgtcgaccctggtggg
gaatcatcagagaccatgaagcaggctaagatccagaggagggggtcggagatggccctg
actaccatcacgtcgcacttcggcagcaggctgctggagtccttaggcaaggtctgggag
tccatgacaggtcagctcatggagcaaatcaaaccaggaaaatttgatcgaacgtttcac
ttggataaggaccatcaagcccaagatctcgtcacctctatgcaagtctttgaaactctt
gctcctgtattacattcctgttatcatcccaagttagaggagctgctgccccatttcatc
acgtgcctggagcacccttacacgtccgttcgtcacatgtcatcccgttgcttgggaatg
atgtgtaaggtcattaccatggcaaccatgaaccgtctcctgatggaggtcgttcccatg
ctaggagcccaggaggatgaggtcaagcgagaaggagcggtggaatcattagcttgtgtc
atcgatcagcttggcatggacatcgtcccctacatcgttctcctggtcgtacctctattg
ggcaggatgagtgaccaggtggacagtatcaggctgaccgctacccaatgcttcgccaca
ctgatcaggcttatgccactggaggctggtatcccagacccacccgccatgacagacgcc
cttgttgagcagaagaacagggagagacgtttcctggaacagctcctagacagctccaag
ctagacaactacaaggtccccgttcctatcaaggctgaactcaggaagtatcaacaggat
ggtgtgaactggttagcattcctcaacaagtacaagctccatggcatcctgtgcgatgac
atgggtctgggaaaaaccctccagtctatctgcatcatggccggcgaccaccaccaccgg
aacgccgcctacaagaaggccaagagcgccgactgcgtgcccatgccgtccatagtggtg
tgtcccccgacactgaccggtcactgggtctacgaggttcagaagttctgctccacccag
tatctgaatcccctgcactacactggtcctccaacagaacgtacaaggttgaggagcaaa
gtcaagaagcacaatcttgtggtcgtctcttatgatatcgtcaggaatgatatcgatttc
tttaggacaatagattggaattattgcatccttgatgagggtcatataatcaagaatgga
cggaccaagttagccaaggccatcaagcagctcaatgcttgtcatagactcatcctatct
gggacacctatacagaataacgtattggagctctggtccctgtttgatttcctgctgcct
gggttcctgggaacagagaaacagttcatagcaaggtttgccaaacccatcctccaaagc
cgagatgccaagagttcttccaaagaacaagaagctggagctctagcgatggaagctctt
catcgtcaggtcttaccgtttctcttgagaagactcaaagaagatgtccttgatgacctt
ccacccaagatcatccaggattactactgtgagctcagtccactacaggttcaactgtat
gaggactttgctaggtctagggccaagatgggagtggtggaaaccatctcttccgaggct
gaggagaagaaacccaaagcacctgctgctgctactggacatatattccaggcattgcag
tatctacgtaaggtatgcaaccatccactacttgtcctcaacaacaaacatccacagtat
gaagcggtgaccaagcaactgaaagaacagaactcatccctgcacgacatcaaccatgct
ccaaaactaactgccctcaagcaactgttgttagattgtggtatcggtgtggatgctcta
ggatctaacccaggctctgagttgacccagtctgtggttggccagcatcgggtgctactc
ttctgtcaactcaaaggaatgctggacatcgtagagaaagaccttctcagatctcagatg
ccctcagtagcatacctcaggttagatgggagtgtgcctgctagccaaagacatgatctt
gttcacagatttaacaatgatccgtctattgatattcttctgttgaccactcatgtcggt
ggtctggggctgaacttgaccggagcagacacggtcatctttgtagaacatgactggaat
cccaccaaagacttgcaggcaatggatagggctcataggataggacagaagaaggtggtc
aatgtctaccgtctcatcactagaggtacacttgaggagaagatcatggggtaa
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integrated database retrieval system
