Lytechinus pictus (painted urchin): 129269189
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Entry
129269189 CDS
T09066
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129269189
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129269189
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129269189
Spliceosome [BR:
lpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129269189
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129269189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
129269189
NCBI-ProteinID:
XP_054762632
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All DBs
Position
2:complement(10380645..10393167)
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AA seq
381 aa
AA seq
DB search
MDINPTLSTKVRFFILDEADGLLSAGYGNQITRMWEQIPKITNDGKRLQMVVCSATLHSF
DVKKLAEKVMHFPIWIDLKGQDSVPETVHHVVCKVDPREDTTWQRKSEKVQTDGVHYEDP
VRWGSHDRETLSEGVKILKIDYLVKAIGEHRMDQAILFCRTKIDCDNCERFLTTLGGGPR
ARPDHQYSCVCLHSDRRPPERRENLQKFKDKKARFLICTDVAARGIDVKGIPFVVNVTLP
DEKQNYVHRIGRVGRAERMGLAISLVSTIPEKVWYHSCPSRGKSCHNTALKDQGGCCIWY
NEMQYLADIEEHLGVIIDQTDPSIKVKADEFDGKVTYGQKRKHLGSGYKGHADDLAPAVS
ELHNLEKRAQSSFLQFSGIAS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatccaacattaagtacaaaggtgaggtttttcattttggatgaagcagat
ggtctattatcagctggctatggaaatcagatcacaagaatgtgggagcagattcctaaa
atcacaaatgatggaaaaagacttcagatggtagtgtgctctgctactcttcactccttt
gatgtgaagaaacttgctgagaaggtgatgcacttcccaatctggattgatcttaaagga
caggatagtgtcccagagacagttcatcatgtggtgtgtaaagttgacccaagggaggat
acaacatggcagaggaaaagtgaaaaagtccaaactgatggcgtccattacgaagaccca
gttagatggggcagtcatgacagagagactctgtctgaaggagtaaaaatcctgaagatc
gactaccttgtgaaggccattggcgaacatcgtatggaccaagctattctattctgccgt
acaaagatagattgtgataattgtgaaagattcctgacaaccttaggagggggtcctcgt
gcccgacccgaccatcagtactcatgtgtgtgtctccatagtgatagaaggccaccggaa
cgaagagaaaatctccaaaaattcaaggacaagaaagctagattcctgatttgtactgat
gtagctgctcgtggtattgatgttaaaggaatcccatttgttgtcaatgtgacattacct
gatgagaagcaaaactatgttcatcgtatcggacgtgttggcagagctgagaggatgggt
ctagctatttcacttgtttctacaatccctgaaaaggtatggtaccactcctgtcctagt
cgtggtaagagttgccacaacactgcattgaaggaccaaggtggttgttgcatctggtac
aatgagatgcagtatctagctgacattgaagagcatctaggggtaatcatcgatcagaca
gatccctccattaaagtaaaagctgatgaatttgatggcaaggttacttatggacagaag
agaaaacatctagggagtggctataagggtcatgcagacgacttggccccggcagtatct
gagttacacaacctagagaagagagctcagtcatccttcttacagttttctggcatcgct
tcatga
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