Lytechinus pictus (painted urchin): 129269198
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Entry
129269198 CDS
T09066
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129269198
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129269198
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129269198
Spliceosome [BR:
lpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129269198
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129269198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
DEAD
Motif
Other DBs
NCBI-GeneID:
129269198
NCBI-ProteinID:
XP_054762644
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All DBs
Position
2:complement(10404156..10431617)
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AA seq
375 aa
AA seq
DB search
MTAFAEFGCLPEITQAVDEMGWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVHETLRDKAEGKTKESTASVSMESSSWKMNVYDRGDAMAIDKEGLLCQSREMQSWHG
TRANKGVSGKGKYYYEAEVTDEGLCRVGWATDKADLNLGTDKLGFGFGGTGKKSFGRQFD
TYGESFGKDDIIGCYLDLDSGEIYFSKNGKDLGLAFSIPGHLLKSTYYPTVVLKNAEMKF
NFGLTPFKNSPLKGYSAICEAPSNCVVKSQNMGGGLAGPAKAAPNAPQAIIIEPSRELAE
QTLNQIRLFKKHVTTHCPRELLIIGGQAAKEQVDALFKGIDIVVATPGRLEDLMSTGKLL
LSQVGLLFIILVQSC
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctttgcagaatttggttgtctccctgagatcactcaggctgtggatgaaatg
ggatggctgttgccgactgatgttcaggctgaagccattcctctcatcctcgggggtgga
gatgttcttatggctgctgaaactggaagtggaaaaactggggcgttctgtctaccagtc
atccaaattgtccatgaaacactgagagacaaggctgaaggaaagacaaaggaatccact
gcttctgttagcatggaatccagctcttggaagatgaatgtttatgacagaggagatgca
atggctattgataaagaaggtctgctgtgtcaaagtcgagagatgcaatcatggcatggt
accagggctaataagggtgtcagtggtaaaggaaagtactattatgaggctgaagtgaca
gatgaaggactttgcagagttggatgggctactgacaaagctgacttgaatctgggaact
gataagctgggttttggattcggtggaactggcaagaagtcatttggacgacagtttgat
acttacggagagtcatttggaaaggatgatattattggttgttacttggatctagatagc
ggagaaatctacttctctaaaaatggcaaagaccttggcttggcattctctatccctggt
catcttcttaagtctacctattaccccacagtggtcctcaagaatgctgagatgaaattc
aattttggtctcactcctttcaagaattcaccacttaaagggtacagtgctatctgtgaa
gcgccttcaaactgtgttgtcaaatctcaaaacatgggtggtgggcttgctggccctgca
aaagcagctcccaatgctcctcaggcaatcatcatcgaaccatcgcgagaacttgctgaa
cagactttgaaccagataagactcttcaaaaaacatgttacaactcactgcccgagagaa
ttgttgatcattggaggacaagcagccaaggaacaagtagatgcactttttaaaggaatt
gatattgttgtagccacaccaggacgtttggaagatctgatgagtactggaaaactttta
ctgtcacaggtagggttattgttcattatactagtacagagctgctag
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