Lytechinus pictus (painted urchin): 129269260 Help Entry 129269260         CDS       T09066                                  Name (RefSeq) DNA ligase 1-like isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism lpic  Lytechinus pictus (painted urchin) Pathway lpic03030   DNA replication lpic03410   Base excision repair lpic03420   Nucleotide excision repair lpic03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lpic00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     129269260    03410 Base excision repair     129269260    03420 Nucleotide excision repair     129269260    03430 Mismatch repair     129269260  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lpic03032]     129269260    03400 DNA repair and recombination proteins [BR:lpic03400]     129269260 Enzymes [BR:lpic01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      129269260     6.5.1.6  DNA ligase (ATP or NAD+)      129269260     6.5.1.7  DNA ligase (ATP, ADP or GTP)      129269260 DNA replication proteins [BR:lpic03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     129269260  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      129269260 DNA repair and recombination proteins [BR:lpic03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      129269260    NER (nucleotide excision repair)     Other NER factors      129269260    MMR (mismatch excision repair)     Other MMR factors      129269260 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  129269260 NCBI-ProteinID:  XP_054762707 LinkDB All DBs Position 10:complement(27991059..28017113) Genome browser AA seq 948 aa AA seqDB search MPGQRSITSFFSSPKPKPSLPPDAVKENKTSDKKVRSPLHARNGSPPNEEPARKKARRIL DSDSEEEENEDKKPVKMECEEEEQSRKEDVNEKKTDVEMTSPSVKAEPQITSPSIKTEPQ TPTSTKKDVPLRKTARKHMRKRDSPPKPVKEESKDLEEEKMEEENIKTEEKTTLKVKEEP TSPTEKKKNDDKSPSKKSPKPSKVKSLSSDKKSKKSKTESAKKEKQVKKEEKPVKEEEKS VETKEEPMEKKESKKSTEKDVKKEKEEPAKEKETKKTNTFTWGSSSKKSDDKSSGTSYRP GSASYHPLESACWKKGESVPYKALADTFSIIEDTSGRLKTIEILSDFLTSVMLLTPDDVK LCIYLCLNKLAPAYEGLELGIGETVLMKAIAQATGRSVDKLKVAAAEKGDLGLVAESSRS TQRTMFTPPRLTIKKVFSKLKDIANLSGNSSMSKKVDLIKGLLVACKDCEARYLIRSLGG KLRIGLAEQSVLVALGHAAVLAKPESDEMILKSKVNTSEKVKKAMEEAALLVKTAYCEMP TYDALIPVLMTHGVTELPNHCRLTPSIPLKPMLAHPTKGVSEVLDRFQDTPFTCEYKYDG ERAQIHLLESGKIHIYSRNQEDNTTKYPDIIARLSAAVDEKVTSCILDSEAVAWDPEKKQ ILPFQVLSTRKRKDADAGDIKVQVCVFAFDLLYLNGEPLVRKPLRERRSLLRDHFMEVEG EFIFAKSMISSDTDDIAEFLEESVKGNCEGLMVKTLDKDATYEIARRSHNWLKLKKDYLD GVGDTLDVVVIGGFQGRGKRVGCYGGFLLACYDEENEEFQSICKIGTGFKEEELEKHTKF FKDHVIDKPRPYYNYDSSVAPDHWFDTVQVWEIKAADLSVSPVHKAAIGIVDPAKGISLR FPRFIRIRDDKKPEEATGAAQVASMYNNQDQIKNQQANKSSKTEEDFY NT seq 2847 nt NT seq  +upstreamnt  +downstreamnt atgccaggtcaacgatcaataacctctttcttttcgtcaccaaagccgaagccttcatta cctccagatgcagtcaaagagaataaaaccagtgataaaaaggttcgttctccccttcat gcaaggaacggatcacctccgaacgaggaaccagctcgtaagaaagctaggaggattctg gacagcgatagtgaagaagaagaaaatgaagacaagaaaccagtcaagatggaatgcgag gaggaggaacagagcaggaaagaagacgtgaatgagaagaaaacagatgttgagatgact tctccaagtgtcaaagcagaaccacagattacttctccaagcatcaaaaccgaacctcag actccaacgtccactaagaaggatgttcctctcagaaagacagctcgaaagcatatgagg aagagagattcacctcctaaaccggtcaaagaagaatctaaagaccttgaagaagagaag atggaggaagaaaacattaagactgaagagaagactactttaaaggttaaagaggagcct acatcaccaacagaaaagaaaaagaatgatgacaaatcaccttccaaaaaatcccccaaa ccaagcaaagtaaaatcgctcagcagtgacaagaagtccaagaaatctaagactgaatca gcaaagaaagaaaaacaagtaaagaaggaagaaaaacctgtaaaagaggaagaaaaatca gtggagacgaaagaagaaccaatggagaagaaagaatctaagaaatccactgagaaagat gttaaaaaagaaaaagaggaaccagcaaaggagaaagaaaccaaaaagacaaatacattc acatggggcagcagcagtaaaaaatctgatgacaaaagctccggaactagttacagaccc ggatctgcatcctatcatcctttggaaagtgcatgttggaaaaaaggagagagtgttcca tacaaggctctggctgacacattctcaatcattgaagacacaagtggaagattaaagacc attgagatcttgtctgatttcttgacctctgtaatgctgctgacccccgatgatgttaag ctgtgtatctacctatgtcttaataagttagcacctgcttatgaaggtcttgagcttggt atcggtgagaccgtcctcatgaaggccatcgcacaggccacagggcgatcagtagacaag ctgaaagttgctgctgcagaaaagggagatttaggactggtagcagagagcagtagaagt acacagcgtaccatgttcacccctccaagattgaccatcaagaaagtcttctctaaactc aaagatattgccaaccttagtgggaattcaagtatgtcaaagaaagttgatctgattaaa ggactgctagtggcctgtaaggattgtgaagctagatatctcatcagatcacttggaggg aaattgaggattggtctggcagagcagtctgttcttgtagccctgggtcatgctgctgtc ttagccaagccagagtcagatgagatgatcctaaagagtaaggttaatacctcagagaaa gtcaagaaagcaatggaagaagcagctcttcttgtcaaaacagcctactgtgagatgcca acgtacgatgccctgattccggtgttaatgacccacggagtgacggagcttcccaatcac tgtcgtctgactccatcgattcctctcaaacctatgttagctcatcccaccaaaggagta tcagaggtcctagatagattccaagatacgccctttacttgtgaatacaagtatgatggt gaacgggctcagattcatctgcttgagtctggtaagattcacatatacagcaggaaccaa gaagacaacacaaccaaatatcctgatatcattgcaaggctctctgcagctgttgacgag aaggtgacatcgtgtatcctggattcggaagcagttgcgtgggatccagagaagaaacag atcttaccattccaggtcttgagtacgaggaaaaggaaggatgctgatgccggagatatt aaggtccaagtctgcgtctttgcttttgatcttctttacctcaatggagaacccctggtt aggaaacctctcagagaacgtagaagtctattgagagatcacttcatggaagtagaagga gaattcatctttgccaagtccatgatctcctctgatactgatgacattgctgaattctta gaggaatctgtcaaaggaaactgtgaaggtctaatggtgaaaacattggacaaggatgca acctatgagatagcaagacgatcacataattggctcaagctgaagaaagactacttggat ggagttggagatactctggatgtggtcgtgattggtggtttccaggggcgtggcaaaaga gttggttgctacggaggtttcctactcgcatgctacgatgaagagaatgaagagtttcaa tctatctgtaagattggaactggcttcaaggaagaagagttggagaagcacacaaagttc ttcaaggatcatgtgattgataagccacgcccatactataactacgacagcagtgtagcc cctgatcattggtttgatacggtacaagtatgggagatcaaagctgccgatctctcggtc tcacccgtacacaaggcagctataggaatagttgatccagcgaagggtatttctctacga tttccaagatttatccgtatccgtgacgacaaaaagccagaggaggcaacaggggcagct caggtggctagcatgtacaacaatcaggatcagatcaagaatcaacaagcaaataaatcc agcaaaacagaggaagatttctattaa

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