Lytechinus pictus (painted urchin): 129269307
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Entry
129269307 CDS
T09066
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129269307
03015 mRNA surveillance pathway
129269307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129269307
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129269307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_7
Motif
Other DBs
NCBI-GeneID:
129269307
NCBI-ProteinID:
XP_054762775
LinkDB
All DBs
Position
10:30332475..30344133
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AA seq
332 aa
AA seq
DB search
MPRSRTRSRSRSGGRGDRRSRGRDKKRRSKSVTSRSSSGSDSSSGSSSRSRSRSSSSGSS
SGSSRSRSRSSRSSSRSSSGSSSGSGSDSGSASGSSRSRSRSQSRSRSKSKGRSRSRSVT
KVKGGGGDKDGKAGGAIEKETSRKFDDRKEKESKERSRPRRSRTRSRTPPRRKRSPSPKS
SRLHVGKLTRNVNKDHLMEIFSIYGAVKSIDIPPDRTHPHVSRGFAYIDFMSSNDAEKAL
KHMDGGQIDGQEISAAFVLAPVSRPRPLPLPRRSPPRRGGGWRRSPPPRFRDRRRSPPRR
RSPIRSRTRSRSRSRSPARRRRYSRSSSSSSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaagtcggacaaggagtagaagtaggagtggagggaggggtgataggagaagc
cgagggagagacaagaagagaagaagcaaatcagtaacaagtagaagttcatctggttca
gacagtagttcaggaagttccagcaggtcaaggagccgttcaagctcctcagggagcagt
tcaggcagctcccgatcacgatccaggtcatcaagatccagcagtaggtccagctctggt
agttccagtgggtcagggagtgattcgggtagtgcttcaggaagcagccggagtaggagc
aggagccaaagcaggagcaggagtaaaagcaaaggaagaagtagaagcagaagtgtcacc
aaagtaaagggaggaggtggagacaaggatgggaaagcaggaggtgcaatagagaaggag
acatccagaaagtttgatgatagaaaagagaaggaatcaaaggaaagatctagaccaagg
agaagtagaacaaggtcaagaacaccccctcgtcgcaagcgatctccctctcccaagtca
tcccggcttcatgttggaaagctgacgcgtaacgtcaacaaggatcacctgatggagatc
ttctccatctatggtgccgttaagagcattgacattcctcctgatcggacccatccacat
gtgtcccgtggcttcgcctacattgatttcatgtcatccaatgatgcagagaaggctctc
aaacatatggatggaggtcagatcgatggtcaagaaatctctgctgcctttgtattagct
ccagtttctcgtcccagaccccttccactaccaagacgtagcccacccaggagaggaggc
ggatggagacgatcacctcccccaagatttagggacagaagaaggtcaccaccaaggaga
aggtcacccattagatccaggaccagatctagatcaaggtccaggtcaccagctagacgt
cgtagatacagccgatcaagctccagttcctcaagataa
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