Lytechinus pictus (painted urchin): 129269316
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Entry
129269316 CDS
T09066
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129269316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpic02000
]
129269316
Transporters [BR:
lpic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129269316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_23
AAA_30
AAA_29
AAA_15
MMR_HSR1
NPHP3_N
GTP_EFTU
TsaE
Flp1_like
Motif
Other DBs
NCBI-GeneID:
129269316
NCBI-ProteinID:
XP_054762783
LinkDB
All DBs
Position
10:30747194..30785283
Genome browser
AA seq
1377 aa
AA seq
DB search
MALLWVPCLFSPTAIAFFMDRCVAFEQINGLQFSNLGDGYFPPYAPLVMIFVDIFLYLIM
AIYLENVVPGAYGQSMSPLFFLKPSYWCGREVKDPNDRTGLLSVNGQAEGEHNIEDALVE
PVPAALKGRNGIRIRSVKKTFHGKGGKPDVKAVNGISLDIYEGQITCLLGHNGAGKSTLM
NCLTGMVKATDGHAVAYGLDMFDKSDMEKVRNMTGVCLQENTLIDLLTPEEHLKFYAGLT
GISKSQIPDKVEKALEEIDLKNQRATFAKDLSGGQKRKLCVGIAIIGNPKILFLDEPSSG
MDPYSRRKMWSLLKKQREGRVTLLTTHFMDEADILADRKAIISKGQLKCYGSSLFLKNKF
GVGYRLGLVKEGSCEQDEVTDVIQTYIPEASVIRSHGMELAYSLPLKDVSSFAGMFKSLE
EKSGDPAFGIQSYGVSMTTLEEVFLKIGEEAEIDEADAAIEAAQINQSAPSNGTSSPGPV
PDVPPAAVSGMTMEDSGPGTGASVTVNMEQSPLDSTIMATQPIVVKHNEQLKSLIYIEAI
RAARNPATYICRLILPIALMIVGGVLSLIITFGGDGPSDAPAPLVFNPSMYFSPPGGSMD
NEQSTDLLYQNSLPSGQDIADLVAEFDNLNIGSNATANLSALYENRPHNGAFDVMDLGTT
GSASQFTAYYNDTAQHSLPVTLSIMSTALLNLYGNESIITAASHPFPKPASIPTYTFTSG
ILFVYIFGLGVTWVLMGFPVDRVKERESKIKAQLRISGIDTLSYWGSVFVIDVAQMLLVV
IIGLIIIFAMQVPSLTTGGAVFSLIVTVILYVPNAIIHSYCISFIFDKFETAQGYAFVIL
VELPLFLFLPTMFIDLYVSAAAAASFHLVMCVVWPGYAIFGALYFIDKVYQLASIRGMAD
SVTFADYFEPDAYIWPTMLILLFDLFMLVFFLRFCEVVKSGGRVTDTCPCLVSKKVGMTA
KNDDVIPDEDSDVKEERMKVEEMYESDQASAVAISELRKEFVKRSGDACGGDQKETTKVA
VRNLSLTVQTGEVLGLLGPNGAGKTTTMNVVTADTEATTGQVRVGGYDVSSALSDAYASL
GYCPQIDPLWDDVTMREHLEGFAGFKGIHPSDRKQIANNFMSAIGVMEHADKKAKELSGG
TKRKLCFALSMLGNPKIVLLDEPSTGMDPSSKRFLWNVITSSFLEKKGAILTTHSMEEAD
AVCSRVGIMIQGQLRCLGTTQHLKDKYGGGYILEIKLNPGVQYYTSDQTTTAILDILDEK
MDVLHKQVLLLIPNAEVTESFAERITYKIPRDSNITLSTVFAFLEQGKQDYGIEEYSFSQ
TTLEQVFIEFAKTQVDSPDEEAEMMSVTQENERNGRTGSRHSVRHQPKPQISVNMDV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggccctactttgggtcccatgtctcttctctcctactgcaatagctttcttcatggac
aggtgtgtggcatttgagcaaatcaatggtcttcagtttagcaacctcggagacggctac
tttccaccctatgctcctcttgtgatgatcttcgtggatatctttctttatctgatcatg
gccatctatctggagaatgttgttcctggagcgtacggtcagagcatgtccccactgttc
ttcttaaaaccatcctattggtgtggcagggaagtcaaggatcctaatgaccggactgga
cttctaagtgtcaacggtcaagcggagggtgagcacaacatcgaggacgccttggttgag
ccagtcccagctgctctcaaagggagaaatggaataaggattcgcagtgtgaagaagacg
ttccatgggaaaggtggtaaaccagatgtcaaagcagtgaatggtatttcattggacatc
tacgagggtcaaattacctgtcttcttggccataatggagctggcaagtctaccctgatg
aactgcttgactggtatggtcaaggccaccgatggccacgctgttgcctacggactggac
atgtttgacaagtctgatatggagaaggtccgtaacatgaccggagtgtgcctccaggag
aatactcttatagatctcctaacccctgaagaacatctcaagttctacgcaggacttaca
gggatttcaaagtcacagatcccagacaaggtggagaaagccttggaagagatcgacctc
aagaatcagcgagctacttttgcaaaggatctcagtggaggtcagaagcgcaagctctgc
gttggaatcgcaatcattggtaacccgaagatcctctttctagatgagcctagcagtgga
atggacccatactcaagacgtaagatgtggtctcttctgaagaaacaaagagaaggaaga
gtgaccctactcaccacacactttatggatgaagctgatatattagcagatcggaaagca
atcatctctaaaggacagttaaaatgttatggttcatccttgttcctgaaaaataaattt
ggtgttggataccgtcttgggcttgtaaaggaaggtagctgtgaacaagatgaggtcact
gatgtaatccaaacatacatccctgaggcctctgtcatacgatctcatggtatggaacta
gcatacagtttacccctcaaagatgtctcatcatttgcaggtatgttcaagagcttggag
gagaagtcaggtgacccggcattcggtatccagagctatggtgtttccatgacaacccta
gaggaagtcttcttgaaaattggagaggaggctgaaatagatgaggctgatgcagctatt
gaagctgctcaaatcaatcaatcagcaccctctaatggaacctctagccctggacctgtc
cctgatgttcctcctgcagcagtatctggtatgacaatggaagactctggacctggaaca
ggtgcttcagtaacagtcaacatggaacagtctccacttgactcgaccatcatggcaacc
caacctatcgtagtgaaacacaatgaacagctcaagagtctgatctatatcgaggcgatt
cgagctgccaggaatccagcaacatacatctgtcgattgatcctgcccatagcattgatg
atcgtcggtggtgtcttgtccctcattatcacgttcggtggagatggacctagtgacgca
cctgctcccctggttttcaacccctccatgtacttctcacctcctggaggaagcatggac
aatgaacagtcaacggatctcctgtaccaaaactcactgccaagtggtcaagatattgct
gacctggttgcagagtttgacaatctaaacattggatctaatgcaactgccaacctaagt
gccctctatgaaaaccgcccgcataacggcgcctttgatgtcatggatcttggtacaact
ggttcagccagccagttcacagcctactacaatgacactgcccagcactctctgccagta
accctgagcatcatgtctaccgccctcctgaatctctacggcaatgaatctatcatcaca
gctgcaagccatcccttccccaaaccagccagcataccgacttacaccttcaccagtggt
atcctcttcgtctatatctttggattgggagttacgtgggttctgatggggttccccgtt
gacagggtcaaagaaagagagtcgaagatcaaagctcagcttcgcatctctggaatcgac
accctctcctactggggatccgtcttcgtcatcgatgtcgctcagatgctcctggtcgtc
atcataggtctcatcatcatatttgccatgcaagtgccttctctgacaaccgggggcgct
gtgttctctctcattgtgacggtgatcctgtatgttcccaatgctatcatccattcctac
tgcatcagttttatatttgataaatttgagacagcccagggttatgcctttgtgatactt
gttgagctaccattgttcctctttttacccacgatgttcattgacctgtatgtctcagcg
gctgctgctgcttcatttcaccttgtcatgtgtgtggtctggcctggctatgccatcttt
ggagctctctactttatagacaaggtttaccaactcgcctcgataaggggaatggctgat
agtgtcacctttgcagattactttgaacctgatgcatacatctggccaacaatgctcatt
ttgctgtttgacttgttcatgctggtctttttcctgaggttctgtgaagttgtgaagtca
ggtggtagagtgacagacacctgcccttgccttgtttccaagaaggttggaatgactgcg
aaaaatgatgacgtcattccagatgaggatagcgatgtaaaagaagagaggatgaaagtg
gaagaaatgtatgagtctgatcaggcctctgctgtagccatctctgagctgaggaaagag
tttgtgaagaggagcggcgatgcttgcggtggcgaccagaaggagactaccaaggttgcc
gttcgtaacctgtctctgactgttcagaccggtgaggtcctgggtctcctaggacccaat
ggtgcaggcaagacgactaccatgaacgtggttacagctgatacagaggctactaccgga
caggttcgtgtcggaggttatgacgtttcttcagccttgagcgatgcctacgcctccttg
ggctactgtcctcagatagaccctctatgggacgacgtcactatgagagaacatcttgaa
gggttcgctggctttaaaggaatccatccatcggataggaaacaaatcgctaacaatttt
atgtctgctattggagtaatggagcatgcagataaaaaggcaaaggaattatctggagga
actaaaagaaagctgtgctttgccctgagtatgcttggtaacccaaagattgttcttctt
gatgaaccctctactggtatggatccaagctcaaagagattcctctggaatgtcatcaca
tcgagtttccttgagaagaaaggagccatcttaacaactcattccatggaggaggctgat
gctgtgtgctctagggtgggcatcatgatccaaggacaactcagatgtcttgggacaacc
cagcatctgaaggacaagtacggcgggggctacatcctggagatcaaacttaaccctggt
gtccagtactacaccagtgaccagaccactacggccatcttggacatcctggacgagaag
atggacgttcttcacaagcaggtccttctccttatccccaatgcggaggtcaccgagagc
ttcgccgagcgcatcacttacaagatcccccgggatagcaacatcacgctctctaccgtc
tttgctttcttagagcaaggtaaacaagattatggaattgaagaatacagcttcagtcag
accacattagagcaggtgttcattgagtttgcaaagacacaggtagacagtccagatgag
gaggcagagatgatgtccgttacacaggagaatgaacgcaatggaagaaccggcagcaga
cacagtgtccgacatcaacccaaaccacagatatcggtcaatatggatgtttaa
DBGET
integrated database retrieval system
