KEGG   Lytechinus pictus (painted urchin): 129269433
Entry
129269433         CDS       T09066                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03013  Nucleocytoplasmic transport
lpic03015  mRNA surveillance pathway
lpic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129269433
  09122 Translation
   03013 Nucleocytoplasmic transport
    129269433
   03015 mRNA surveillance pathway
    129269433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpic03019]
    129269433
   03041 Spliceosome [BR:lpic03041]
    129269433
Messenger RNA biogenesis [BR:lpic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     129269433
    TREX complex
     129269433
Spliceosome [BR:lpic03041]
 Complex C
  Other components
   EJC/TREX
    129269433
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129269433
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 129269433
NCBI-ProteinID: XP_054762910
LinkDB
Position
10:complement(38765212..38779311)
AA seq 287 aa
MSGDKIDMSLDDIIKANKGTRGGRGGRGRGGNRGRGRGAGGAGGGRGARGGRGGGGGGGP
MRRQRGGGAGRPAPYSRPKQMPDQWQHDMYSEGGGAIRRQGLSTAANGPGKLLVSNLDFG
VSNNDIEELFADFGSLKKAAVHYDRTGRSLGTADVIFERRADAMKAIKQYHQVPLDGRPM
NIQLVGSATELESNPMQSRPRQQAGGGRGGGGRGGVRRNQGSYNQGGFNQGGYNQGRRGG
GGGRGGGTRGRGVRGRGRGRGGGGNKPTPTAAELDAELDAYNSQIDS
NT seq 864 nt   +upstreamnt  +downstreamnt
atgagtggtgacaagatcgacatgagccttgatgatataatcaaagcaaataaagggacc
cgtggtggtcgaggaggaagaggaagaggtggtaaccgtggcagaggacgaggtgccggt
ggcgctggcggaggacgtggtgcccgaggaggccggggtggaggaggcggcggaggaccg
atgagaagacaaagaggtggcggtgctggcagaccggcgccatattcacggccaaaacag
atgcccgatcagtggcagcatgatatgtacagtgaaggtggaggtgcaatcagaagacaa
ggattatcaactgcagcgaacggacctggaaaactgctagtttcaaatctggactttggt
gtttcaaataatgatattgaggaattgtttgcagactttggtagtctaaagaaggctgcg
gttcattatgacaggacaggaagaagtcttggtacagcagacgttatctttgaaaggaga
gcagatgctatgaaagcaatcaagcagtaccatcaagtgccattagatggtcgaccgatg
aatattcagttagtgggttcagcgactgagctagagtcaaacccaatgcaatcaagaccg
agacagcaagctggaggaggtcgaggaggaggaggaaggggtggagtccgtcggaatcag
ggaagctacaaccaaggaggcttcaaccaggggggttacaaccagggccgaaggggcgga
ggaggcggacgagggggaggaaccagggggcgtggagtccgagggagaggtaggggcagg
ggtggtggaggtaataagcccacaccaactgctgccgaattggatgctgaattagatgcg
tataactcacagattgatagctag

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