Lytechinus pictus (painted urchin): 129269433
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Entry
129269433 CDS
T09066
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129269433
09122 Translation
03013 Nucleocytoplasmic transport
129269433
03015 mRNA surveillance pathway
129269433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129269433
03041 Spliceosome [BR:
lpic03041
]
129269433
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129269433
TREX complex
129269433
Spliceosome [BR:
lpic03041
]
Complex C
Other components
EJC/TREX
129269433
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129269433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
129269433
NCBI-ProteinID:
XP_054762910
LinkDB
All DBs
Position
10:complement(38765212..38779311)
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AA seq
287 aa
AA seq
DB search
MSGDKIDMSLDDIIKANKGTRGGRGGRGRGGNRGRGRGAGGAGGGRGARGGRGGGGGGGP
MRRQRGGGAGRPAPYSRPKQMPDQWQHDMYSEGGGAIRRQGLSTAANGPGKLLVSNLDFG
VSNNDIEELFADFGSLKKAAVHYDRTGRSLGTADVIFERRADAMKAIKQYHQVPLDGRPM
NIQLVGSATELESNPMQSRPRQQAGGGRGGGGRGGVRRNQGSYNQGGFNQGGYNQGRRGG
GGGRGGGTRGRGVRGRGRGRGGGGNKPTPTAAELDAELDAYNSQIDS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgacaagatcgacatgagccttgatgatataatcaaagcaaataaagggacc
cgtggtggtcgaggaggaagaggaagaggtggtaaccgtggcagaggacgaggtgccggt
ggcgctggcggaggacgtggtgcccgaggaggccggggtggaggaggcggcggaggaccg
atgagaagacaaagaggtggcggtgctggcagaccggcgccatattcacggccaaaacag
atgcccgatcagtggcagcatgatatgtacagtgaaggtggaggtgcaatcagaagacaa
ggattatcaactgcagcgaacggacctggaaaactgctagtttcaaatctggactttggt
gtttcaaataatgatattgaggaattgtttgcagactttggtagtctaaagaaggctgcg
gttcattatgacaggacaggaagaagtcttggtacagcagacgttatctttgaaaggaga
gcagatgctatgaaagcaatcaagcagtaccatcaagtgccattagatggtcgaccgatg
aatattcagttagtgggttcagcgactgagctagagtcaaacccaatgcaatcaagaccg
agacagcaagctggaggaggtcgaggaggaggaggaaggggtggagtccgtcggaatcag
ggaagctacaaccaaggaggcttcaaccaggggggttacaaccagggccgaaggggcgga
ggaggcggacgagggggaggaaccagggggcgtggagtccgagggagaggtaggggcagg
ggtggtggaggtaataagcccacaccaactgctgccgaattggatgctgaattagatgcg
tataactcacagattgatagctag
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