Lytechinus pictus (painted urchin): 129269485
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Entry
129269485 CDS
T09066
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lpic04040
]
129269485
Ion channels [BR:
lpic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129269485
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Ank_KRIT1
DUF5104
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129269485
NCBI-ProteinID:
XP_054762967
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Position
10:42415679..42447578
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AA seq
1314 aa
AA seq
DB search
MFCDNHPHSSIENQFVLRHHSRQQSSTDSLQNISATVCNNRMWNQNHDGDKSTVNNVQSG
DDDQDSGELSNPAFEMTSMSTSPGGPSILPRTLNALDDDERSVSTLMSTSNKVRFSKHGL
QLEPVEDESVCGKSSTSSNDMNELSSFHGKPRKVAFDLDTDDQGKTPRDHEDELVIEPDH
ANFVNSKLSFLDTELEKDEERNVKNGFLGNVKAKFPKKKRRNKLGRVTSPILMSNLVDAV
RRGDMENMKNLLTENSSFNLNKLDKSNLALLHYASIQDRDFIARELLRRGADVDVLDLDI
KATPLHAAARMNSVNVAHVLLARCADVDRKTSTGLTPLHISARRGHEEITNILLTLGRAD
VHARDAENATALHAGAMSGNVAVCKLLVQHGADIRAKDVNSMTPLMKAVVSGHVALVDMF
LERAHQICLSIEAYINDEDIDGNTCLHLAVSKRRSEVIQRLFGYRMSPNLIKKNGMGPLH
IAAINGSTGVALHLIQNGAEIDMKDDEGMTPLHRATFYNQVETMALLIHEGAMINEIDNI
GFTPLLCAACKGHTPAGELLLSRGADIFVFDMHRKSPLHWAAETDHLGFVEFLLKNGGYR
LLEITDIYEQTALHYAAEAGNVEMIKRLIQYEVKGEVRDMTEKTPVHIAAQAGYLSCVEE
LLHQTPLLLNDEDQDGMTPLLIACYHGHRDLVKTLLKIGADITSVNDDHRTALMLAAMNN
HVETMSILIEHNCDIHALDKYKNSALHLSVDGGHIGPANLLIRAGADQSASNNEGFTPLE
LAIDADHGEIAAAIIKSRDWRIAMQSKDELMISPMKALIEKLPDVALLVMDRCVHKTYTE
QHITSYDVKYEYQYIDPGPDDESTRANGYRYFAIRTMCQYGREKLLAHELSQSVLKRKWN
RFARVLFYIDLLFYVAFTACLTTHITLASVPPDEAYWDEVNNVLLKCPSYNLSLNPELKD
TFFNKAGSNSLWYVNPAPFYTGYAIIVYCVTMIFGELAEMYTLRLKYFTEMVNLVDWATL
ATAIWFVLPPGRAPCFHNWNAGIVAIFLSWMKLIMYLRSFKTTGLYVLMFIETLISLVKA
MTVFIMFVIAFTFTFRMLFSTQYRFSTTDLAFMSTMTMMLGEMNKDDIFNEENDLTPYEV
TSYFCFLVFIFLMPMVLNNLTIGIAVGDIEGIRKKAFIKRNSVQADYVYHLENKCPLWLQ
RFLYQSEYIIRVQKERYRNKFTSMFFPREDEALIELDDKSEPRNAEHVLEELQRQKFTLA
SLKLMVRQQGDILQRLADKEGVASKVQDIKGLTELFDEQPTEEMDQTDPTSSIA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgataaccatccacattcctcaattgaaaatcaatttgtgcttagacatcac
agccgtcaacaatcatccacagacagtctgcaaaatatatcagccacagtctgcaataat
agaatgtggaaccaaaaccacgatggcgacaaatcgactgttaacaacgtgcaatcaggc
gatgatgaccaagattcaggcgagctctccaatcctgctttcgaaatgacatcgatgtcg
acttcacccggaggaccatcaatacttccaagaacgttgaatgccttggatgatgacgaa
agatcagtgtcgactctgatgtcgacgtccaacaaagtacggttcagcaagcatggtctt
cagcttgaaccagtcgaagacgagagcgtctgcggaaagagttcgacatcgtcgaacgat
atgaatgagctcagtagctttcatgggaagccacggaaagtcgctttcgatttggatact
gatgaccaagggaaaacacctcgcgatcacgaagacgagttggttatcgaacctgaccat
gccaatttcgtgaatagcaaattgtcgtttctcgacaccgagttggagaaggatgaggag
aggaatgttaagaatggtttccttggaaacgttaaggcgaaattcccgaagaagaagagg
aggaataagcttggacgggtgacgtcaccgatactcatgtccaacttggtcgatgctgta
agaaggggtgacatggagaatatgaagaatctcttgactgaaaacagttcatttaatctg
aataaactggataaaagtaacctagccctccttcactatgcttcgattcaagatagagat
ttcatcgccagagaacttctacgacgaggtgcagacgtcgacgtactcgacctcgacatc
aaagccacgccccttcacgctgctgcgcggatgaacagcgtcaacgtcgcccacgtcctt
ctcgcacggtgtgccgacgtcgatcgaaagacctcgactggtctaacaccgcttcatatc
agtgctcgacgaggacatgaagaaatcacaaatatcttgttaacactagggagggctgat
gtacatgccagagacgcggaaaatgctacagctcttcatgcaggtgcgatgagcgggaat
gtagctgtctgtaaactattggtccaacatggagccgatatcagagcgaaggacgtgaat
agtatgacaccactaatgaaagctgttgtgagtggacatgtcgctttggtagatatgttc
cttgagagagcgcaccaaatatgtcttagtatcgaagcatacatcaacgatgaagacata
gatggtaatacgtgtcttcatctcgccgtctccaagcgacgatcagaggttattcagcgt
ttgtttggctatcgaatgagcccaaatctcatcaagaagaacggcatgggccccctgcac
atagcagcgatcaacggatcgactggtgtagctttacatttgattcagaacggggctgaa
atcgatatgaaagatgacgaaggcatgacacctcttcatcgggcaacgttttacaaccaa
gtggagaccatggctctgttgatccacgaaggtgcaatgatcaatgaaattgataacatt
ggttttacaccgcttctctgcgctgcctgtaagggccatactccagccggtgaattgctg
ctttcacgaggagctgatattttcgtgtttgacatgcatcgcaagtctcccttacactgg
gccgccgagacggaccatctgggcttcgtcgagttcttgctaaaaaatggcggttatcgg
ctgttagaaattacagacatctacgagcagacggctctacattacgcggcagaggcggga
aatgtcgagatgatcaaaaggttgatccagtatgaggtcaagggtgaagtgagagacatg
acagagaaaacaccggtccatatcgctgctcaagcaggttatttatcttgtgttgaggag
ctactccaccagacaccattgctgttaaatgatgaagaccaagatggaatgacaccgtta
cttatagcctgttaccatgggcacagggatcttgtcaaaacacttcttaagatcggggca
gatattacgagcgtaaatgacgatcataggactgccttaatgttagcagcaatgaataac
cacgtggaaactatgagtatactgatcgaacataactgcgatatacacgccttggacaaa
tataagaactccgctcttcacctgagcgtagatggtggtcacatcggaccagccaacctt
ctaatccgagccggagctgaccaatcagcatcgaacaacgaaggtttcactcctctagag
ctagccattgatgctgatcatggagagattgctgctgctatcatcaaaagtagagactgg
agaatcgcgatgcagagtaaggacgaattgatgatctcgcccatgaaggcgctgatcgaa
aagcttcccgacgtcgccctcctagtcatggaccgatgtgtccataagacatataccgaa
caacatattacatcctatgacgtaaagtatgaatatcaatacatcgaccctggaccagac
gatgaatcgacaagagctaatggatatcgatacttcgctatcaggacgatgtgtcagtac
ggacgggaaaaactgctagctcatgaattatctcagagcgttttgaagaggaaatggaat
cggtttgcaagggtcttattctacatcgatctgctattctatgtggcgtttacagcgtgc
ttaacaacacacatcaccctagcatccgtgccaccggatgaagcatattgggatgaggtt
aacaatgtattgttgaaatgtccatcctataacctgtcactaaatcctgaactaaaggac
actttctttaacaaagctgggtccaattctctatggtacgttaaccccgcaccgttctat
actggatacgccattatagtctactgcgtaacaatgatttttggagaacttgctgaaatg
tatactcttcgtttaaaatacttcacggagatggttaatctggtagactgggccacacta
gcaaccgccatttggtttgttttacctccgggtcgtgctccatgttttcataactggaat
gctggtatcgtcgccattttcctgtcttggatgaagcttatcatgtatttaagaagtttc
aagaccaccgggctttacgttttaatgttcattgaaacccttatatctttggtgaaggct
atgacagttttcattatgtttgtcattgcatttaccttcacatttagaatgctcttcagt
acacagtaccgattttccaccacggacctcgcatttatgagtacgatgacgatgatgctg
ggcgagatgaataaagacgatatcttcaacgaggaaaacgacctgacaccatacgaagtg
acgtcatacttttgctttctagtcttcatcttcttgatgcccatggttctcaacaacctc
acgattggtattgctgttggagatattgaaggtatcagaaagaaggcattcatcaaaaga
aattctgttcaggccgattacgtctatcatcttgaaaacaagtgtcccctttggcttcag
cgatttctgtatcaatcagaatatatcatcagagttcagaaggaacgttatcggaataaa
tttacctcaatgttctttccacgtgaagacgaggcactcatcgaactagatgacaagtca
gaaccaagaaatgccgaacatgtgctggaagaattacagagacaaaagttcacgttggca
tcgctgaaattaatggtgagacaacaaggggacatccttcaaaggcttgctgataaagag
ggagtagcatctaaagtccaagatataaaaggtcttactgagttattcgatgaacagcct
accgaggaaatggatcagacagatccaacctcttcaatagcttag
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