Lytechinus pictus (painted urchin): 129269514
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Entry
129269514 CDS
T09066
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129269514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129269514
03012 Translation factors [BR:
lpic03012
]
129269514
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129269514
Translation factors [BR:
lpic03012
]
Eukaryotic type
Release factors
129269514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
129269514
NCBI-ProteinID:
XP_054762997
LinkDB
All DBs
Position
10:complement(44130183..44150564)
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AA seq
561 aa
AA seq
DB search
METDSHETSGLDNWDDQEDPGPGLSNQFSTLNVGAKPFVPNVNAPAFVPGSYASNTQSEL
EATATAGNAALESAGFDNDAVVMEAQVEEEEEEEEEPMQEEESPKPVKDNGSMKAFIAPK
PSKQQTPKEEEPESKKEHVNVVFIGHVDAGKSTIGGHIMYLTGGVDKRTLEKYEREAKEK
NRESWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHRSFVPNMIGGAAQA
DLAVLVISARKGEFETGFERGGQTREHAMLAKTAGVKHLVILINKMDDPTVEWSLTRYDE
CKEKLLPFLRKVGFNPKKDIHFIPVSGITGANLKVSAPDKCPWYTGHPFITYIDELPPLP
ARNSSGPLRLPITDRYKDMGTILLGKVESGNLRRGGTYTLMPNKTNVEILQIISDENETN
SARTGENVKLKVRGVEEEDVSPGFVLCDTTDVCHTSKMFDAQIAIVEYKSIICSGYGAVL
HIHNAVEEVQITKIIALIDKKTGAKTKQRPRFIKQDQVAIARLETTGVLCMETFKEFSQM
GRFTLRDEGKTIAIGKVLKLL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagattctcatgaaacgtcgggtctggacaactgggacgatcaagaagatcca
ggacccggtctttctaaccagttttcgacgttaaatgtgggagcgaaacccttcgtacca
aacgtgaatgcaccggcatttgtgccgggatcatatgcctccaacacacaatcggaattg
gaggccacagccacagcaggcaatgcagctctggagagtgcagggtttgataatgatgca
gtcgtcatggaagcccaggttgaagaggaagaggaggaggaagaagaacccatgcaagag
gaagaatctccaaaacctgtcaaggataatggatcaatgaaagcctttattgcacccaag
ccttccaagcaacaaactcctaaagaagaagaaccagaatctaagaaagaacatgtcaat
gttgtcttcatcgggcacgttgatgcaggaaagtccaccattggaggtcatataatgtat
ctcacaggaggtgtagataagagaacactagaaaaatatgaaagagaggctaaagaaaag
aacagagagagttggtacttatcatgggcactagacaccaaccaagaagagcgtgataag
ggaaagacggtggaggtcgggagagcgtactttgagacagaaaagaaacatttcacaatc
cttgatgcccctggccatcgaagctttgtaccgaacatgatcggtggtgctgctcaagct
gatttagctgtattggtaatatcagcacggaaaggtgaatttgaaactggttttgaaagg
ggaggacagacacgagagcatgcaatgttagcaaagacagcaggcgttaaacatctagtc
attcttattaataaaatggatgaccctacagtagagtggtctcttacaaggtatgacgag
tgcaaggagaagttgcttccgttcctccgtaaggttggctttaatcccaaaaaagacatt
catttcattcctgtgtcggggatcacgggggccaacctcaaggtgtccgcaccagacaag
tgcccttggtacaccggccacccgttcatcacgtacatagatgaattacccccgctgcct
gccaggaactcctcagggcctctacggttacccatcacagataggtacaaggacatgggt
acaatcttgctaggaaaagtagaatcagggaatttaaggagaggaggaacatatacccta
atgcccaacaaaacaaatgtagaaattcttcaaatcatctcagatgaaaatgaaactaac
tctgcaagaacgggagaaaacgtcaaactaaaagttcgaggggtagaagaagaggatgta
tctccgggttttgtcctttgtgatacaacagatgtatgtcatacctccaaaatgtttgat
gcacagattgcaattgtagaatataagtccattatctgttcaggctatggtgcagtgctt
cacatccacaatgctgtagaagaagttcaaatcactaaaatcattgcactgatagataag
aagacgggtgccaagacaaagcaacgaccacgcttcatcaaacaggaccaggtagccatc
gctagattggagacgacaggagtactctgtatggaaaccttcaaggaattctcacaaatg
ggtcgctttactcttagagatgaaggtaaaaccattgcaatcggcaaggtcctgaagctg
ttgtaa
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