Lytechinus pictus (painted urchin): 129270346
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Entry
129270346 CDS
T09066
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129270346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpic02000
]
129270346
Transporters [BR:
lpic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129270346
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_30
RsgA_GTPase
Flp1_like
TsaE
Motif
Other DBs
NCBI-GeneID:
129270346
NCBI-ProteinID:
XP_054763716
LinkDB
All DBs
Position
10:complement(30654554..30686740)
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AA seq
1057 aa
AA seq
DB search
MIQHRKAIISKGQLKCYGSSLFLKNKFGVGYRLGLVKEGSCEQDEVTDVIKTYIPEASVI
RSHGMELAYSLPLKDVSSFAGMFKSLEEKSGDPAFGIQSYGVSMTTLEEVFLKIGEEAEI
DEADAAAEQTSKLKKNKIAIEAAQINLSAPSNGTSSPGPVPDVPPGAVSGMTMEDSGPGS
GASVTVNMEQSPLDSTIMATQPIVVKHNEQLKSLIYIEAIRAARNPATYICRLILPIALM
IVGGVLSLIIKFGGDGPSDAPAPLVFSPSMYFSPPGGSMDNEQSTDLLYQNSLPSGQDIA
DLVAEFDNLNIGSNATANLSALYENRPHNGAFDVMDLGTTGSASQFTAYYNDTAQHSLPV
TLSIMSTALLNLYGNESIVTAASHPFPKPASIPTYTFTSGILFVYIFGLGVTWVLMGFPV
DRVKERESKIKAQLRISGIDTLSYWGSVFVIDVAQMLLVVVIGLIIIFAMQVPSLTTGGA
VFSLFVTVILYVPNAIIHSYCISFIFDKFETAQGYAFVILVELPLFLFLPTMFIDLYVSA
AAAASFHLVMCVVWPGYAIFGALYFIDKVYQLASIRGMADSVTFADYFEPDAYIWPTMLI
LLFDLFMLVFFLRFCEVVKSGGRVTDTCPCLVSKKVGMTAKNDDVIPDEDSDVKEERMKV
EEMYESDQASAVAISELRKEFVKRSGDACGGDQKETTKVAVRNLSLTVQTGEVLGLLGPN
GAGKTTTMNVVTADTEATTGQVRVGGYDVSSALSDAYASLGYCPQIDPLWDDVTMREHLE
GFAGFKGIHPSDRKQIANNFMSAIGVMEHADKKAKELSGGTKRKLCFALSMLGNPKIVLL
DEPSTGMDPSSKRFLWNVITSSFLEKKGAILTTHSMEEADAVCSRVGIMIQGQLRCLGTT
QHLKDKYGGGYILEIKLNPGVQYYTSDQTTTAILDILDEKMDVLHKQVLLLIPDAEVTES
FAERITYKIPRDSNITLSTVFAFLEQGKQDYGIEEYSFSQTTLEQVFIEFAKTQVDSPDE
EAEMMSVTPENERNGRTGSRHSVRHPPKPQLSVNMDV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcatcggaaagcaatcatctctaaaggacagttaaaatgttacggttcatcc
ttgttcctgaaaaataaatttggtgttggataccgtcttggacttgtaaaggaaggtagc
tgtgaacaagatgaggtcaccgatgttatcaaaacatacatccctgaggcttctgtcata
cgatctcatggtatggaactagcatacagtttacccctcaaagatgtctcatcatttgca
ggtatgttcaagagcttggaggagaagtcgggtgacccggcattcggtatccagagctat
ggtgtttccatgacaaccctagaggaagtcttcttgaaaattggagaggaggctgaaata
gatgaggctgatgcagctgctgaacagacctcaaaattaaagaaaaataaaatagctatt
gaagccgctcaaatcaatctatcagcaccctctaatggaacctctagccctggacctgtc
cccgatgttcctcctggagcagtatctggtatgacaatggaagactctggacctggatca
ggtgcttcagtaacagtcaacatggaacagtctccacttgactcgaccatcatggcaacc
caacctatcgtagtgaaacacaatgaacagctcaagagtctgatctatatcgaggcgatt
cgagctgccaggaatccagcaacatacatctgtcgattgatcctgcccatagcattgatg
atcgtcggtggtgtcttgtccctcattatcaagttcggtggtgatggacctagtgacgca
cctgctcccctggttttcagcccctccatgtacttctcacctcctggaggaagcatggac
aatgaacagtcaacagatctcctgtaccaaaactcactgccaagtggtcaagacattgct
gacctggttgcagagtttgacaatctaaacattggatctaatgcaactgccaacctaagt
gccctctatgaaaaccgcccgcataacggcgcctttgatgtcatggatcttggtacaact
ggttcagctagccagttcacagcctactacaatgacactgcccagcactctctgccagta
accctgagcatcatgtctaccgccctcctgaatctctatggcaatgaatctatcgtcaca
gctgcaagccatcccttccccaaaccagccagcataccgacttacaccttcaccagtggt
atcctcttcgtctatatctttggattgggagttacgtgggttctgatggggttccccgtt
gacagggtcaaagaaagagagtcgaagatcaaagctcagcttcgcatctctggaattgac
accctctcctactggggatccgtcttcgtcatcgatgtcgctcagatgctcctggtcgtc
gtcataggtctcatcatcatatttgccatgcaagtgccttctctgacaaccgggggcgct
gtgttctctctctttgtgacggtgatcctgtatgttcccaatgctatcatccattcctac
tgcatcagttttatatttgataaatttgagacagcccagggttatgcctttgtgatactt
gttgagctaccattgttcctctttttacccacgatgttcattgacctgtatgtctcagcg
gctgctgctgcttcatttcaccttgtcatgtgtgtggtctggcctggctatgccatcttt
ggagctctctactttatagacaaggtttaccaactcgcctcgataaggggaatggctgat
agtgtcacctttgcagattactttgaacctgatgcatacatctggccaacaatgctcatt
ttgctgtttgacttgttcatgctggtctttttcctgaggttctgtgaagttgtgaagtca
ggtggtagggtgacagacacctgcccttgccttgtttccaagaaggttggaatgaccgcg
aaaaatgatgatgtcattccagatgaggatagcgatgtaaaagaagagaggatgaaagtg
gaagaaatgtatgagtctgatcaggcctctgctgtagccatctctgagctgaggaaagaa
tttgtgaagaggagcggcgatgcttgcggtggcgaccagaaggagactaccaaggttgct
gttcgtaacctgtctctgactgttcagaccggagaggtcctgggtctcctaggacccaat
ggtgcaggcaagacaactaccatgaacgtggttacagctgatacagaggctactaccgga
caggttcgtgtcggaggttatgacgtttcttcagccttgagcgatgcctacgcctccttg
ggctactgtcctcagatagaccctctatgggatgacgtcactatgagagaacatcttgaa
gggttcgctggctttaaaggaatccatccatcggataggaaacaaatcgctaataatttt
atgtctgctattggagtaatggagcatgcagataaaaaggcaaaggaattatctggagga
actaaaagaaagctgtgctttgccctgagtatgcttggtaatccaaagattgttcttctt
gatgaaccctctactggtatggatccaagctcaaagagattcctctggaatgtcatcaca
tcgagtttccttgagaagaaaggagccatcttaacaactcattccatggaggaggctgat
gctgtgtgctctagggtgggcatcatgatccaaggacaactcagatgtcttgggacaacc
cagcatctgaaggacaagtacggcgggggctacatcctggagatcaaacttaaccctggt
gtccagtactacaccagtgaccagaccactacggccatcttggacatcctggacgagaag
atggacgttcttcacaagcaggtccttctccttatccccgatgcggaagtcaccgagagc
ttcgccgagcgcatcacttacaagatcccccgggatagcaacatcacgctctcgaccgtc
tttgctttcttagagcaaggtaaacaagattatggaattgaagaatacagcttcagtcag
accacattagagcaggtgttcattgagttcgcaaagacacaggtagacagtccagatgag
gaggcagagatgatgtctgttacaccggagaatgaacgcaatggaagaactggcagcaga
cacagtgtccgacatccacccaaaccacagttatcggtcaatatggatgtttaa
DBGET
integrated database retrieval system
