Lytechinus pictus (painted urchin): 129270529
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Entry
129270529 CDS
T09066
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129270529
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lpic04031
]
129270529
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
129270529
GTP-binding proteins [BR:
lpic04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
129270529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
129270529
NCBI-ProteinID:
XP_054763872
LinkDB
All DBs
Position
10:<44666661..44684512
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AA seq
224 aa
AA seq
DB search
FILSPGIDHKTTTILLDGKRVKLQLWDTSGQGRFCTILRSYSRGAQGILLVYDITNRWSF
DGIARWIREIDEHAPGVPKILVGNRLHLAFKRQVSGEEAQEYAIRNDMAYFEVSPLCDFN
VTESLTELSRLVLKRNGMERLWRTNKVLSLQDFCCRTIVNCTSTYSIDKLPIPMTLRSRL
KSFADANHMHRYMLPPPDIRSKKRRTILNAQDPPYSARKSCIVS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttcatcctttccccaggcattgatcacaagacgacaaccatattattggatggcaagagg
gtgaaattacaactatgggatacatcaggccaaggtagattctgtaccatcctcagatcc
tactcacgtggcgctcagggcattctactggtctatgacatcacaaacaggtggtccttt
gatggcatagcaaggtggatcagagaaattgatgagcatgcaccaggggttcccaagatc
ctggtcggcaatcgtctccatcttgccttcaagcgtcaggttagcggtgaggaggcccag
gagtacgccattaggaatgacatggcttactttgaggtcagcccgctctgcgatttcaac
gtgacagagtcgctgacagaactctcgcgtcttgtgctcaagcgtaacggcatggagagg
ttgtggagaacaaataaagtgttgagtctgcaggacttctgctgccggacgatcgtgaac
tgtacttccacctactccatagacaaactacccatccctatgacccttcgctcacggctc
aagtccttcgcggatgccaatcacatgcacagatacatgctgcccccgccagacatccgc
tccaagaagcgcaggacgatacttaacgctcaggacccgccgtattcagcgcgaaagagc
tgcatagtgtcatga
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