Lytechinus pictus (painted urchin): 129270858
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Entry
129270858 CDS
T09066
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic02010
ABC transporters
lpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129270858
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129270858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpic02000
]
129270858
Transporters [BR:
lpic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129270858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DUF4162
AAA_15
AAA_23
TFB6
Elongin_A
Motif
Other DBs
NCBI-GeneID:
129270858
NCBI-ProteinID:
XP_054764169
LinkDB
All DBs
Position
11:18552908..18599227
Genome browser
AA seq
2329 aa
AA seq
DB search
MHDTVCNETALGEIIQPQNPEDLDDISRVLCNLTSSQLDEFSKDLWQSLDKQKFIDWARN
NSDVPSNVYDDIRQIMQEIRELESFKNLTSEIEDILKNNDTGKLICGDLPFLGFSVPSFE
QDAQEPPPPPAGPGEALEPVDVLEPEESVDPVDPPTFPPISDDLGNRDDNDTIPGTERCP
WLVDLLQTGSGNTKQTEYILSLFLPLIQGYIFYTPNTTATRQIMEKADEMFNSLRDMKDL
AEKWTEVSPCIRAFVENQDLPTMATCLNRSSEGLPPFPDNPPDLLPVTALPGGIPLPSNL
STVVPPTLRNNSFLPDLFGNNTEDILNLLDAMDSLANTTLVILKCFELDRFRPYKSEMDL
VEDAKIHIENFTFWAGIVFTNIDDDPDSSNIPPLLDYKIRMDSAFSESTTRIMDGYWTPG
PRKGIRDRKYFESGFIFIQDILEQAIIKVKTGKEDLGAGMYVKQFPYPCYISDLFVQSLS
GVLPLFMIISWIFSVAMIIKGVVYEKERRLKEVMKVMGLSNGVHWLAWFIDSFLVMFTSC
VLLVLVLKYGAIITYSDGGIVLLFLVSFCISTIMLCFLISVFFSKANLSAACGAVIFFLT
YVPFTLVITWDAYLTRGAKFGVSLLNTIAFGYGSVYLSLYEVQGTGVQWNNINTSPLNGE
HGFTFMQVLAMMWLDAFIYGLLTWYIEAVKPGQYGMPRPFYFPFTYSYWFGHGKSKDIDG
ERIDMSHARFRGAPNSDFEADPAHLPLGVAIRHLLKIYSTGKKLAVDNLSVNFYEGQITS
FLGHNGAGKTTTMSILTGLFPPTEGTAYIYGRDIRTSIDEIRQSLGMCPQHNVLFDRLTV
AEHLWFYARLKGATANDVAIEMEQMLQDLNLPHKRDEYSANLSGGMKRKLSIAIAFMAGS
KTVILDEPTAGVDPYARREIWDLLSKYKTGRTIIMSTHHMDEADILGDRIAIIAKGKLRC
CGTSLFLKSHFGSGYYLVLTKKTGEHGLNRNVDDDVAPLNLNPDDKTDGDVIHAEKASEA
GDVPDLGYCSVAVITAFIKKFVPKATVAENIGTEISYQLPLSSARNQMLSKLFRELEMNM
DKLYISSYGLSDTSLEEVFLAVTEENEMVDMEPGCTDIATDGGRLPRPFMGRGSIRRRHY
RMPSASSINLSITDENQGLLANDVTDAVHQEAMAQSAQTEPGQDATRDGGDAGEDDQNST
PMTPFQRETTQTQKAPTDGITSEPQGAVASSVPPRVKGHSRNKGHARQVSFSQIDATVLA
PPVHAHEVLDLSDKRVTGLKLIQRQFSALFFKRFHHARRSKKGFIAQVILPVVFVCFSML
FATLIPPIQQPSALRLVPWLYGSNNYVFYSQDNSNNPVSARMEEALVDGPGIGVRCMPNS
DIGYPCEPHRATEWGKPHKPAFPDYLYDDYESRNLSCDCDRGFQSCDVGAEGPPPPTRME
ASTDFLQNMTSVNVSHYLVKTMEDFILNRFGGMSFIENNEDALLSINQSRQLIGEWMRGN
VSSRPGEGSPNREFLPSGDTISEVYEVLSSLTTPSNVKVWWDNNGWHALPIFMNVMNNLL
LRAHVDSANSSLYHGMTVTNHPINFTSSQIDEEIRSKSSVNLAVAMFVMFALAFVPASFV
VFLISERTSKAKHLQMVSGINPTIYWVSNLCWDMVNYMIPAILTIVIFLAFRMTAFTGGD
SLPTIILLLFLYGWAITPMTYPAAFVFKVPSTAYLSMACGNMLVGITTVTSTYILDYLGT
DDQYLHNVNEVLKRVFLLFPPYCLGRGLMDMASNELKAQVLSEYTDYTAPDPFQWDQLGK
SLFALFIEGFVFFILTLLIEYRFFITPRQVHPPPSLSEQEDDDVQRERQRVLTGRAMNDV
IRIENLTKVYRTSRGPMTAVDKMCVGIPKGECFGLLGVNGAGKTTTFKMLTGDTSVTSGT
AHINTFSILDSMQDVNRSMGYCPQFDALDDLLTGQEHLEFYARVRGVVEEEVPKVADWGI
RKLGLTEYRDRSAGTYSGGNKRKLSTAIALIGNPPVVFLDEPTTGMDPKSRRFLWNCITS
IVKEGRSVVLTSHSMEECEALCTRLAIMVNGKFKCLGSTQHLKNKFGDGYTLTIRLGGDV
PQTAALADFMDVEFPSASLREQHFNMLEFQLSSADTILSKVFQYLEDKRSRFNIEDYSVS
QTTLDQVFINFASQQRTGDETTVELTLFPPSANNVQANNRVALSTDGASARYIPTPHELT
SINSNDVPLQPKNTNMRHQRQRSGQLDKVTVNSLFAAPPPQPMAASSPIATAHPQNTNKI
MTQYAGYSNPIYDGNGPPTEPVVSFTSTDSGVTPEGGLQMDEIDLSSQC
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatactgtatgcaacgagactgctctaggtgagatcatccaacctcagaaccct
gaggatcttgacgatatcagcagggtcctctgtaacctgaccagtagccaactggatgag
ttctcgaaggatctctggcagtcattggacaaacagaaatttattgattgggccaggaat
aattcagatgtaccatctaatgtttatgatgacatcagacaaataatgcaagagattcga
gagctggagagtttcaagaacctgacctcagagattgaggatatcctcaagaacaacgac
acgggcaagctcatctgcggagacctgcccttcctgggcttcagtgtgccgagttttgaa
caggacgcccaggagcccccaccgcccccagcaggaccaggagaagccctggaacctgtg
gatgtcctggagccggaggagtcggtagatccagtagatcccccgacgttccctcccata
tccgatgatctggggaacagagatgacaatgatactatcccaggtacggagcgatgtcct
tggcttgttgatctcctacaaacaggctcagggaacaccaaacagacagagtacatccta
tcgctcttcctacctctcatccaaggctacatcttctacacacccaacaccactgcaacc
aggcagatcatggaaaaggctgatgagatgttcaacagtttgagagatatgaaagattta
gctgagaaatggacggaagtatcgccttgcatcagagctttcgttgaaaatcaggacctc
cctaccatggccacctgtttgaaccgatccagcgagggcctgccccctttccctgacaat
ccacccgatctcctaccagtcacggcgcttccagggggcatccctctaccctccaacttg
tccacggtggtgcctcccaccctccggaacaactctttcctaccggacctgtttgggaac
aacacggaggatattctgaacctcctggacgccatggacagcctggccaacacgactctt
gtgattctgaagtgctttgaacttgacagattccgtccatacaagagtgaaatggatctt
gttgaggatgcaaagattcatattgaaaatttcacattctgggccgggattgtgtttact
aacattgatgatgatccagatagcagtaacattcctcctctgctagactacaagatccgc
atggactctgctttcagtgaaagtactacaaggatcatggatgggtactggacaccaggc
ccaaggaagggcatcagagataggaaatactttgagagtggattcatcttcatccaagat
atcctggagcaagcaatcatcaaagtgaagaccgggaaagaagacctcggagcaggaatg
tacgtcaagcagttcccatatccatgctatatcagtgatctgtttgtgcaatccttatct
ggagttctgcctctcttcatgatcatctcctggatcttctcggtggcgatgatcatcaag
ggtgtcgtctacgagaaggagagacgtctcaaggaggtgatgaaggtgatggggcttagc
aacggggttcactggctggcgtggttcatcgatagcttcctcgttatgttcaccagctgt
gtgctcctggtgctggttttgaagtatggagcgatcatcacctactctgatggagggatc
gtcctcctcttcctggtctccttctgtatctccaccatcatgctgtgtttcctcatcagc
gtgttcttctccaaggccaacctctcggctgcgtgcggagcggtcatcttcttcctcacc
tacgtccctttcaccctggtcatcacctgggatgcctacttgaccagaggagccaagttt
ggtgtgtctctgctgaataccattgcctttggctatggctctgtctacctctccctgtat
gaggtccaaggaacaggtgttcaatggaacaacatcaataccagtcccttgaatggggag
cacggctttacgttcatgcaggtcttagccatgatgtggttggatgcgttcatctatggg
cttttgacgtggtatattgaagccgtcaaaccaggccaatatggaatgcccagaccattt
tacttcccgttcacatacagctactggtttgggcatggtaaatctaaggatattgatgga
gagcgtattgatatgagtcatgcaaggtttagaggtgcacccaactctgactttgaggct
gaccccgcccacctaccccttggagtggccatccgtcatctcctcaagatctactctact
ggtaagaagcttgctgtagacaacctcagtgtgaacttctatgaaggacagatcacctcg
ttcctgggccacaatggagccggcaagaccactaccatgtctatattgactggcctgttc
ccgccaacggagggcacggcctacatctatgggagggacatccgtaccagtattgatgag
atcagacagagtctaggaatgtgtccacagcataacgtcttgtttgataggttgactgtt
gcagaacatctttggttctatgcccgtctcaagggtgctactgctaatgatgttgccata
gagatggaacagatgttacaggacttgaatctacctcataagagagatgaatactctgcc
aacctttcaggtggcatgaaaagaaaactgtccatagccattgccttcatggctggctct
aagacagtcatcttagatgaaccaactgctggagtagatccttacgctaggagagagatc
tgggaccttctcagcaaatacaagacaggccgaacaatcatcatgtccacgcatcacatg
gacgaggccgacatcttgggagatcgcatcgctatcattgctaagggcaaactgagatgt
tgcgggacatctctgtttcttaagagtcattttggctctgggtattacctggtactgaca
aagaagactggagaacatgggctcaataggaatgtggatgatgatgttgcaccgcttaat
ctaaaccctgatgataagaccgatggtgatgtgatccatgctgagaaagcaagcgaagct
ggagatgtaccagatcttgggtattgcagcgtggccgtcatcacagccttcatcaagaag
tttgttcccaaggcaacggtggctgagaacatcggcaccgagatctcctaccagctccct
ctctcatcggctcgcaatcagatgctctcaaagttattcagagaactagagatgaacatg
gataaactttacatcagcagctacggcctctctgatacgtcattagaagaggtgttcttg
gccgtgacagaagagaatgagatggtagacatggagccaggctgtaccgacatagcaaca
gatggaggcaggttgccgcgcccattcatggggaggggtagcatcaggaggaggcattat
agaatgccatcggcgtcctccatcaatcttagcatcactgatgagaaccaagggctgctg
gcaaatgatgttaccgatgctgtccatcaggaggctatggcccagtctgcccagacggag
ccaggccaggacgctactcgagacggtggggatgctggagaggatgatcagaattcaaca
cccatgacaccattccagcgtgaaaccacgcaaactcaaaaagctccgaccgatggcatt
acctcagagcctcagggagccgtggccagcagtgtacccccaagggtcaaaggtcacagc
aggaacaaaggccatgctcgtcaggtcagcttcagtcaaatagatgctacggttctagca
ccaccagtccatgcccatgaagtcctagacctcagcgacaagagggtgacaggacttaaa
ttgatccagcgacagttttcagccctctttttcaagcgatttcaccacgcccgacgcagc
aagaagggtttcattgctcaggtcattctgccagtcgtctttgtctgtttctccatgctg
tttgcgaccctgatccctcccatccagcagccatcagccctccgtctcgttccctggctc
tacggctccaacaactacgtcttctacagccaggataattccaataacccagtctctgcc
aggatggaggaggccttggtcgatggaccggggatcggagtgaggtgcatgccgaactca
gatattggttatccctgtgagcctcacagagccacagaatgggggaagccccacaagcca
gccttcccagactacctgtatgatgactacgagtccaggaatctctcctgtgactgtgat
agaggtttccagtcatgtgatgtaggagccgagggaccacctccgccgaccagaatggaa
gcttccaccgacttcctccagaacatgaccagtgtgaatgtcagtcactatctggtcaag
accatggaagatttcattctgaatagatttggtgggatgagttttatcgagaacaatgag
gatgcgctcctttccatcaatcagagccgtcagttgatcggagaatggatgagaggaaat
gtttcttctagaccaggcgagggcagtccaaacagggagttcttgccttcaggggatacc
atcagtgaggtttatgaagtcctcagttctcttactacaccttcaaatgtcaaggtttgg
tgggataacaacgggtggcatgctctgcctatcttcatgaacgtgatgaacaacctgctc
ctacgagctcacgttgattcagctaacagcagcctataccatgggatgacggtgactaac
catcctatcaatttcaccagcagccagatagatgaagaaatcaggtccaaatcatcagtc
aatttggcagtggccatgtttgtcatgtttgctctagccttcgttccagccagctttgtt
gtattcctgatcagcgagcgtacttccaaagccaaacaccttcagatggtgagcggtatc
aatcccaccatttactgggtcagcaatctctgctgggatatggttaactacatgatacca
gccatcctgaccattgtcatcttccttgcattcaggatgacagctttcaccggcggtgat
agcttaccaaccatcatacttctcttgttcctatatgggtgggccatcactcccatgacc
tacccagcagcgtttgtattcaaggtgcccagtactgcatatctttccatggcgtgtggt
aacatgttagtaggcatcaccactgtcacctccacatacattctagattacctaggcaca
gacgatcagtatctgcataacgttaatgaggttctgaaaagggttttcctgctcttccct
ccgtactgtcttgggcgtggcctgatggacatggcgtccaatgaactgaaggctcaggtt
ctcagtgaatacacagattacacagctccagatccattccagtgggatcagcttggaaag
agtctctttgctctctttattgagggcttcgttttcttcatcctgactctcctcattgaa
tatagattcttcattacaccaaggcaagttcatcctccaccaagcttgtctgagcaagaa
gatgacgatgttcaaagagagaggcagagggtactcactggaagggccatgaatgatgtc
atccgcattgaaaaccttaccaaagtttacaggactagcagaggccctatgacagcagtt
gataaaatgtgtgtgggcattccaaaaggagagtgctttggcctgcttggtgtgaatgga
gctggcaagacaacaaccttcaagatgcttacgggggacaccagtgtgaccagtgggacc
gctcacatcaataccttcagtatcctggattctatgcaggatgtgaacaggtccatgggc
tattgtcctcagttcgatgctctggatgacctgctgaccggtcaagagcatctggagttc
tacgccagggtgaggggagtcgttgaggaagaggtaccaaaggtcgctgattggggtatc
cgcaagcttggtctgacagagtacagagatcggtcggcagggacgtacagcggaggcaac
aagagaaagctctctactgctatcgctctcattggaaacccacctgttgtattcctggat
gagccaaccacggggatggaccccaagtcaaggagattcctctggaactgtatcacaagc
atcgtcaaggaaggaagatcagtggtccttacttcacacagtatggaggaatgtgaagcc
ctatgtacccggctagccatcatggtcaatggcaaattcaaatgtctggggagcacacag
catctcaaaaataaatttggtgatggttacaccctgaccatacggcttggaggtgacgtc
ccgcagactgctgccctcgctgacttcatggatgtggagtttccgagcgcttccttacga
gagcagcacttcaacatgctagagttccagctgtcgtctgcagacaccatcctctccaaa
gtcttccaatacctcgaggataagagatcgaggtttaatattgaagactactcggtcagt
cagaccacgctagatcaggtattcattaactttgccagtcaacagaggactggagatgag
actactgttgagttgactctgttcccaccgtcggctaataacgtccaggccaacaataga
gtggccctctctacagatggagcatccgcccgttacattcctacaccccacgaactgaca
agtatcaacagcaacgatgtccctctacagccaaagaacaccaatatgagacatcaaaga
caacgcagcggccagctcgacaaggtcacagtcaattccctcttcgctgccccgcctcct
caacctatggctgcctcgtcgcccatagcaacggcacatccgcagaacaccaataagatt
atgacgcaatacgcgggctacagcaatcccatttacgacggcaatggcccaccgacggaa
ccggtcgtcagtttcacgtcgactgactccggtgtgactccagagggcgggctccagatg
gacgaaattgatttatcatctcagtgttga
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integrated database retrieval system
