KEGG   Lytechinus pictus (painted urchin): 129270917
Entry
129270917         CDS       T09066                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03020  RNA polymerase
lpic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129270917
  09124 Replication and repair
   03420 Nucleotide excision repair
    129270917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpic03021]
    129270917
   03400 DNA repair and recombination proteins [BR:lpic03400]
    129270917
Transcription machinery [BR:lpic03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129270917
  RNA polymerase III system
   RNA polymerase III
     129270917
  RNA polymerase I system
   RNA polymerase I
     129270917
DNA repair and recombination proteins [BR:lpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129270917
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 DUF4817 Mrr_cat FRG NMB0315_dom_I
Other DBs
NCBI-GeneID: 129270917
NCBI-ProteinID: XP_054764228
LinkDB
Position
11:complement(23207498..23225527)
AA seq 210 aa
MNDEAETYRLWRVRKTIMQLCHDRGYLVTQEELDQTLEQFKEQFGDKPSENRPSRKDLTV
LVAHNDDPTDQMFVFFPEEKKVGMKTIKAYCQRMQEENITRAIIVVQERMTPSAKTSLGD
MAPKYILEQFLEAELLINITEHDFVPEHVVMTGDEKAELLSRYKLKDHQLPRIQVGDPVA
RYFGLKRGQVVKIIRPSETAGRYISYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaatgatgaagccgaaacatacagactttggagagttcgtaaaacaattatgcagctt
tgccatgacaggggatacctggtaacccaggaggaattggaccagactcttgaacaattc
aaggaacaatttggagataaaccaagtgagaacaggccgagccgcaaagatttgacagtg
ctggttgctcacaacgatgacccgacggatcagatgtttgttttcttcccagaggagaaa
aaagttggaatgaagaccatcaaagcgtattgccagaggatgcaagaagagaacatcaca
agagctatcattgtcgttcaggaaaggatgacaccatcagctaaaacaagtcttggagac
atggcacccaagtacatcctagaacaattcctagaagctgaacttctcatcaacatcacg
gaacatgactttgttcctgagcatgtcgtgatgacaggggatgaaaaggcagagctcctc
agtagatataaactcaaagatcatcagttaccaaggatacaggtcggggatcctgtggca
aggtactttggactcaagagaggacaggttgtgaagataatccgacccagtgaaacggca
ggaagatacatctcctacagactggtacaatga

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