Lytechinus pictus (painted urchin): 129271083
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Entry
129271083 CDS
T09066
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129271083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129271083
03012 Translation factors [BR:
lpic03012
]
129271083
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129271083
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129271083
Translation factors [BR:
lpic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129271083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
nSTAND3
AAA_19
ATPase
AAA_22
AAA_14
NACHT
Cas3-like_C_2
ABC_tran
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
129271083
NCBI-ProteinID:
XP_054764413
LinkDB
All DBs
Position
11:complement(33995289..34014662)
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AA seq
584 aa
AA seq
DB search
MWYAQRGRGNKQRRELRERGTVSLNDEQERQIKRMLREVEGLRENTPQSNAQPQPKMMRP
ADVVCQNFYGHGLMQDPKLDQQLQEDMIKKEKSEQYRKMQTFRQKLPSFKMKDELLSLIR
SNQVVVISGETGCGKTTQVPQFILDDYINRGQGSTCRVICTQPRRISAITVAERVAAERA
ERCGRDNSVGYQIRLENAFPRPQGCILYCTTGILLKWLEGDKYLKSVSHIVLDEVHERDL
LCDFLLIILKELLPKRSDLKLILMSATLRAELFSDYFNKAPMINIPGFTFGVTEYYLEDI
LEMTRYQPPRPKTTRNEPVWVKYKKGKKNREEEMEKEEKDRKKFNEYLESMRGTYSEQVV
DCLSNMNHDVIDLDLTAELLRYISLQKPDGAILVFLPGWDQISKLHDKLTSQTLFSSDRF
VIIPLHSMMPTLNQKQVFERPPQGVRKIIIATNIAETSITIDDVVYVVNIGRVKETNFDF
TNNIRTMKAEWVSKASAHQRRGRAGRVQDGICYHVYTQLKASEMEEYQVPEIKRTPLEEL
CLNIKTLKLGGVHPFISKAMEAPDIRAIQLAIQSLKQMRAFDDN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatgctcagagaggtcggggcaataaacaaagacgagagctgagagagagaggg
actgtgagcctgaatgatgaacaggagaggcagatcaaacggatgcttcgtgaggtagaa
ggtctcagagaaaatacacctcaatctaatgcccagccacagccaaaaatgatgagacca
gcagatgttgtgtgtcaaaacttctatggccatggactgatgcaagatcccaagctagac
caacagctgcaagaagatatgatcaaaaaggaaaaaagtgaacagtacaggaaaatgcag
accttcagacaaaaacttccctcattcaaaatgaaagatgagctgttatctctcatcaga
agcaaccaggttgtagtaatcagtggagagacagggtgcgggaaaactacccaagttcca
cagttcatcctggatgactacataaacagaggccaagggtcaacatgccgtgtcatctgc
acgcaaccaagaaggataagtgcaattacagttgctgagagagttgcagctgagagagcg
gagaggtgtggtcgtgataacagtgttgggtatcagatacgactagagaacgccttccca
cgcccacagggatgtatcctatactgcacaacgggcatacttctcaagtggcttgaagga
gacaagtatttgaagagtgttagccatattgtattagatgaagtccacgagagagatcta
ctttgtgattttctgctcatcatcctcaaagagcttctaccaaagaggagtgacctgaaa
ttgatactgatgagtgccactttgagagcggaattgttctctgactactttaacaaagcc
cctatgatcaacattcctggatttacattcggtgtcacagaatactaccttgaagatatt
ctagaaatgactaggtatcaacctccaagaccaaaaacaacccgcaatgaaccggtatgg
gtgaagtacaagaaaggtaagaagaatcgggaggaagagatggagaaagaagaaaaggat
cgcaagaagttcaacgagtaccttgagtctatgaggggaacgtactccgagcaagtggtg
gattgtctttctaacatgaatcatgatgtcatagatctcgacctcactgctgaactactt
cgatacatctcgctccagaaaccagacggtgccattcttgtctttctgcctggatgggat
caaatcagtaaactccatgacaaactaacatctcaaaccctcttctcaagtgaccggttt
gtcatcattcctttgcattccatgatgcctacccttaaccagaaacaggtatttgaacgt
ccgcctcaaggagtacgtaagatcatcatagcaaccaacattgcagagacaagcatcacc
atcgatgatgtggtgtatgtggtcaacatagggcgggtgaaggagaccaacttcgatttc
acaaataatatcaggacgatgaaggctgaatgggtcagcaaggcatctgcccatcagagg
agaggacgagctgggagagtacaggatggaatatgctaccatgtgtatacccaactaaag
gcatctgaaatggaggaataccaagtgcctgaaatcaagagaactccccttgaagaactc
tgtctaaacatcaagaccctgaagcttggaggtgtacatcccttcatcagcaaagcaatg
gaagcaccagacatcagagctatccagctagcaatccagagcctcaaacaaatgagagcc
tttgatgataactag
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