Lytechinus pictus (painted urchin): 129271134
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Entry
129271134 CDS
T09066
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129271134
09123 Folding, sorting and degradation
03018 RNA degradation
129271134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129271134
03041 Spliceosome [BR:
lpic03041
]
129271134
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129271134
mRNA degradation factors
5'-3' decay
Lsm complex
129271134
Spliceosome [BR:
lpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129271134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129271134
NCBI-ProteinID:
XP_054764471
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All DBs
Position
11:37313582..37323625
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AA seq
111 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWKMPECY
IRGSTIKYLRIPDEVIDMVKDDIVSKGRGRGGGGRGRGRGGSGRGGEFLLL
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctttctctattaagaactgctcaaaaccaccctatgctggtggaactgaaa
aatggtgagacatacaatggtcatcttgttgcatgtgataactggatgaatatcaacctt
agagaagtcatctgcacatcaagggatggggaccggttctggaagatgccagagtgttac
atcagaggaagcactatcaaatatctcaggataccagacgaggtcattgacatggtcaag
gatgacatcgtatctaaaggtcgcggccgaggaggtggtggtcgaggaaggggtcgtggt
ggatctggcaggggaggtgagttcttgcttttataa
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