Lytechinus pictus (painted urchin): 129272047
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Entry
129272047 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129272047
Membrane trafficking [BR:
lpic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
129272047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
129272047
NCBI-ProteinID:
XP_054765261
LinkDB
All DBs
Position
11:34157524..34196765
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AA seq
1405 aa
AA seq
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MGAMREIVRWTLDACSGFCISSTQPCVLIVSYRRSDDSVVVLGTNCEAEWKPDSSVIAVA
TSGGHLLLLKIVSENNQRLYGTKQSGSYHYKRDVTEADTIAVPRLKITFGATFQVTGGVA
CLCCLKDEMLVATGQGLLRRITWEGIGRSHLDVSIRTVPFSLDLQQSRESLLDDPSIHFK
QLEYSVLLGGFAVVLSDGRAAFLTSESAKFSPKGVHAVWAPDVSNATCVAVNHKFRLIVF
GLANGQGIVFAVDEITGALLVSHRLTLSTSDFPEGCQAAGAVTSLRWTPEGSALILSWLK
GGFSLWSTFGALLMCTLGGDFCPDPSRSKILRIQSMEWGPEGYNLWATKKSLGDTQSHDE
SPDTKGNLIQLSFVKSALAMNPCMANCEHLLLQGERHIYLSCXGTVVKARSQPDLTADLP
HPPNVNGTATVNAACSSNILSGNKQWHCIQIPQNYLDGNWPIRHASVDRTGHYIAVAGRY
GLAHCSPSGKRWKIFGNITQERDMSVTGGLCWWKDFIIAACFNHYESREEIRVYPRASNL
DNAFAFIVKVPFQVLLMNVFKDLLIVFCADYHISLFSCERKDGPPSPTATLTRIQDLSLA
NFVPHPSSLISLTLTSLRSESVSPKSFNQSSEAESLIINVAGRVLMLQRDRTKAPSPNND
YHDRRKTKDAEIPFVAPIILASSVESMWTTSRSSASKPHLMESLWLGCGAAGMKVWLPLF
PDRSEKLHHSFLSKRIMLPFKLRIYPLAVLFEDAVVLGAANDLLSFEPMTPSIERTRRCP
SLPFTTLERTTQIYLHHLLRQLLRRNLGMHALQIARSCMSLPYFSHVLELMLHEVLEEEA
TASEPIPDALLPRVVAFIQEFPQYLETVVHCARKTEIALWPYLFASVGNPQDLFEECLKT
GNLQTAASYLIILQNLETVKASRHHATMLLDAALEHSEWSLCRDLLRFLRSIGSGDLDSP
RPPPPLANHHMFPLGVGRGTPAGVTKPRGRHASHNTKSGGSVDRQADQNTTEKRNSVLSR
QNSVPDPSIDEYYIDTILARHARKLLAAYRLKELGIMTGYLDFKLTSWLVRERMRVARVE
SFVDALKRLHSDFNWPLPVIGNPLSSKSLQRTSTPTGTLNGMHPHTESPTSPVDLIPTTK
FAGIGSIPPKPATPTPIGNRPINGNHPAGGLTLKFSRTQSMLSESTGSDTRTEEAVLKHP
SAKGSDETSVGTTEASEGSLLGEGDNNLDDSFWSNNVTVDELEQFFKEVIWHGPKQSERE
LRYLLKIVLEASCLEWGLLISIILRDRAALSQVVNIASLGEIPMDVIARMREGLSFLELW
ADSECPGYKPLLMAMKPQASVLAEVVERAPSPTRSRSSSASEHSLNESKKHSSRGSMGEP
EPCEDEVFEEVEEEEEKEESACVIS
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccatgcgtgagatcgtgagatggaccctggatgcctgttctggtttttgcatt
tcttccacacagccttgtgtactgattgtgagctatcgtcgctctgatgactcagtggtg
gtcctgggaacaaactgtgaggcagaatggaaaccagactcaagtgtcatcgctgtagct
acgtctggtggccacctgttattattaaagattgtatcggagaacaaccaaagactgtat
ggaacaaaacaatcgggttcttatcattacaagcgggatgtgacggaagcagacacaatt
gctgtaccaaggcttaaaatcacctttggtgctacattccaggtgactggaggtgttgca
tgcctttgctgtctgaaggatgagatgcttgtagctacaggccaagggttattgcgacgg
atcacatgggaaggtatagggaggagtcatctggatgtctccatcaggactgtcccattc
tcgcttgaccttcagcaatccagagaatcgttacttgatgaccccagtatacatttcaag
cagctggaatatagtgtgttacttggagggtttgctgtagtgttgtcagatggaagggct
gcttttctcacctcagaaagtgcaaagttctctccaaagggtgtacatgcagtgtgggca
ccagatgtatccaatgctacatgtgttgctgtcaatcacaaattcaggctaattgttttt
ggattagcaaatggtcagggaatagtgtttgctgtagatgaaatcacaggggcattgctt
gtttctcacagactgacactttcaaccagtgattttccagagggatgccaggcagctggg
gctgtgacgtcgttacgctggacaccagagggcagtgcattgatcctatcatggctgaag
ggcggcttctccctatggagcacctttggagctttacttatgtgtaccttgggaggtgat
ttttgtcctgatccttccagatcaaagatactgaggatacagtcaatggaatggggacca
gaaggctacaatctttgggccaccaagaaatcattaggtgatacacagtcacatgacgag
tcacctgataccaaaggaaacctcatccaactctcatttgtgaagagtgctcttgcaatg
aacccatgcatggctaattgtgagcatcttctacttcaaggtgaaaggcatatctatctt
agctgtngagggacagtggtaaaggccaggagtcaaccagaccttactgctgacttgcct
cacccacctaatgtcaacggtacagccacagtgaacgcagcatgcagtagtaacatcctt
tctggtaacaaacaatggcattgtatacagatacctcagaattaccttgacggcaattgg
cctattaggcatgccagtgtcgacagaacaggtcactacatcgcagtagcgggtcggtat
ggtctggcgcactgctctccgtcgggcaagaggtggaagatctttggtaacattacccag
gagcgagacatgtcggtgacgggtgggttgtgctggtggaaagacttcatcatcgctgcc
tgcttcaaccattatgagagtagagaggagatccgggtatatccacgtgcaagcaatctt
gacaatgcctttgccttcatcgtcaaggttccctttcaagttctgctaatgaatgtcttc
aaagaccttctcatagtcttctgtgctgactatcatatatcactctttagctgcgagagg
aaagacggtccgccaagtcctacagcaactcttaccaggatacaggatctttcactcgct
aactttgttcctcatccgtcctctctcatctcactcacccttacatcactcaggtctgaa
tcagtgtctcccaagtcattcaatcagagcagcgaggccgaaagtctcatcatcaatgtc
gctggtcgtgtattgatgcttcagagagatcgtaccaaagcgccctcgcccaacaacgat
taccatgatcgaaggaaaaccaaagatgccgagatcccttttgtagcgcccatcattctt
gcctcatctgtagaaagtatgtggaccacgtcccggtctagcgccagtaaacctcatctc
atggaatcactctggctggggtgtggagccgcaggaatgaaggtgtggttacctctgttt
ccagaccgatcagagaagttacatcatagctttctgtccaaacgtattatgctgccattc
aagttaagaatatatccacttgctgtcttatttgaggatgcagtcgtccttggggcagcc
aatgacttgctgtcatttgaacccatgactcctagtatagaacggactcgtcgatgccca
agcttgccattcacaacattagaaagaactacacaaatctatcttcatcatttattaagg
cagttgctgagaagaaatcttggaatgcacgcccttcagatagcccgtagttgtatgtct
ctaccatatttctcacatgtcctggaactcatgctccatgaagtcttagaagaagaagcg
actgcttcagaaccaataccagatgccttattaccaagagtggtagcctttatccaggag
tttcctcaatatttagagacagtagttcattgtgcaaggaagacagagatagcactttgg
ccctacctctttgcttcagttggcaatccccaagacttatttgaggaatgtttgaaaact
ggtaacctacagacagcagcatcgtatctcatcatacttcaaaacctagagactgtcaaa
gcaagcagacatcatgcgactatgcttttagacgcagccctagagcacagtgaatggtca
ctgtgccgcgatctactcaggttcctccgttccatcggatcaggggatctggattcacca
aggcccccgccccctcttgccaatcaccacatgtttcccctgggtgtggggaggggaacg
ccagcaggcgtgaccaagcccaggggaagacatgctagccataacacaaagtctggtggc
tctgtggacaggcaggctgaccagaatacgacagagaaaaggaattctgtgctttcaagg
cagaacagtgtccccgaccccagcatagacgagtactacattgataccatactagcaaga
cacgctaggaagctgctggcagcttacagattgaaagagttagggatcatgacgggctac
ctagatttcaaacttacatcatggcttgttagggaaaggatgagagtagctcgtgtagaa
agctttgtcgatgcattgaagagactacattctgatttcaattggccccttcctgtcatt
ggaaaccccttgagttcaaagagcttgcaaaggacatccactccaacgggtaccctcaac
gggatgcacccccatacggagtccccgacctcccctgtggacctcatccccaccaccaag
tttgcaggtatcggcagtataccccctaagcctgccacgcccacccccataggaaacaga
ccaatcaacggtaatcaccctgctggtgggctaaccctcaagttctccaggactcagagc
atgctgtctgaaagcactggcagtgatacgaggacagaggaggctgttcttaaacacccg
tcggcaaaaggttctgatgaaaccagtgttggtacaacagaagcctcagagggaagcctc
ctgggagaaggagataacaatcttgatgatagcttctggtcaaacaacgtcacagtagat
gaactagaacagttcttcaaggaagttatttggcatggaccaaaacaatcagagagagaa
ctcaggtatcttttgaagatagtattagaagctagctgtctggagtggggcctcctcatc
tccatcatcctcagggacagagcagcattgagtcaagtggtgaacatagctagccttggg
gaaatccccatggatgtcattgctaggatgagggaaggtctttccttcctggagctctgg
gctgattcagaatgccctggttacaagcccctcctcatggcaatgaagccccaagccagc
gtcctagctgaggtagtagagagggcaccatcaccaacccggtcaaggtcctcatcagcc
tcggaacactccctgaatgagtcaaagaagcacagttcaaggggaagcatgggagaacct
gagccgtgcgaggacgaggtctttgaagaagtggaggaggaggaagagaaggaggagtca
gcgtgtgttatatcatga
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