Lytechinus pictus (painted urchin): 129272691
Help
Entry
129272691 CDS
T09066
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03410
Base excision repair
lpic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129272691
03450 Non-homologous end-joining
129272691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129272691
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129272691
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129272691
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129272691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_lambd_f
HHH_8
BRCT
HHH_5
HHH
RTT107_BRCT_5
PTCB-BRCT
BRCT_2
ARM_TT21_N
LIG3_BRCT
DnaB_2
Motif
Other DBs
NCBI-GeneID:
129272691
NCBI-ProteinID:
XP_054765777
LinkDB
All DBs
Position
12:35342817..35364527
Genome browser
AA seq
417 aa
AA seq
DB search
MATKKRNSEGDAYSSNDKRQKQNDSVGSSSGMFSGLKVFILQAGLGKARTDIFKKQLLKH
GAAVKPAVNDQTTHVIVDEEMTFPRFCRIMKFEESRVPDRLKIVKAQWLSSCLSEAILID
LEEFILAPVRSEKFKLFTSREETPIKSDDAGSSDGKVELLQGSEMAGTSKGIPGTGSTNI
ITSPSKRPVAKGYDSDDSNYVPSDDEDGGGESGEEEERKVLPSDADSSSNASTPNTSPSK
LPRGNWVCSRPSTAYKATHNEHITEKLEVLMKAYENTKDRWRALGYKKAISALKNYGKDV
TTWEEASAIPGIGTKMADKILEIIESGHLRKIDHVCKGEDMEAIDLFNNVWGAGPTVARE
WVQQGFRTLEDLREKAKLSKQQQIGLKHYHEFLERMPREEAGEIERTVSMERFGGVR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaagaagcgtaattctgagggtgacgcctactcctcaaacgataaaagacaa
aaacagaatgattctgttggtagttcatctggaatgttctctggtctgaaagtcttcatc
ctccaagcaggacttgggaaggcaaggacagatatcttcaagaagcaattgctaaagcat
ggagctgccgtgaagcctgcggtcaatgaccagacaacccatgtcattgtcgatgaggag
atgacattcccaaggttttgtcggatcatgaagttcgaagagtctcgggtaccggatcga
ctgaagatcgtcaaagcccagtggctgagttcttgcctatcagaagcaatattgattgat
cttgaggagttcatcctagctcctgtgaggtcagaaaaattcaagttgttcacatcaaga
gaagagacaccgattaagagtgatgatgctggaagttctgatggcaaggtagagctgctg
caaggttctgaaatggcagggacatcaaagggaattcctggtactggatcaaccaacatc
atcacaagtccctccaagaggcctgtagcgaaaggttatgacagtgatgatagtaactat
gtacccagcgacgatgaagatggtggaggggagagtggggaggaagaggagaggaaggtg
ttgccttctgatgcagactcatcatctaacgcttctacacctaacacctcaccatccaaa
ctaccaaggggaaactgggtttgttcaagaccatcaacagcttacaaggcaacccataat
gagcatattactgaaaagttggaggttttaatgaaggcgtatgagaacacaaaagacaga
tggagagcgctagggtacaagaaggctatatcagctctcaagaattatggcaaagatgtc
acgacatgggaagaagccagtgccatccctggtatcggaaccaagatggcggacaagatc
ctggagatcatagaaagtgggcaccttcggaagatagaccatgtctgcaaaggcgaggat
atggaggccatagatctattcaataatgtatggggagctggaccaacagtagccagggaa
tgggtacaacagggattccggacgcttgaggatttgagagaaaaggccaagctgagcaaa
cagcagcagattggtctgaaacactatcatgaattcttggaaagaatgccaagagaggaa
gcaggagaaattgaaaggactgtaagtatggaacgattcggtggggttaggtga
DBGET
integrated database retrieval system