Lytechinus pictus (painted urchin): 129272713
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Entry
129272713 CDS
T09066
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129272713
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lpic01009
]
129272713
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129272713
03036 Chromosome and associated proteins [BR:
lpic03036
]
129272713
Protein phosphatases and associated proteins [BR:
lpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129272713
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129272713
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129272713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Nbas_N
Motif
Other DBs
NCBI-GeneID:
129272713
NCBI-ProteinID:
XP_054765797
LinkDB
All DBs
Position
12:complement(37296154..37305878)
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AA seq
342 aa
AA seq
DB search
MTADIISTCEFNHDGELLATGDKGGRVVIFQREDSSRNSTPPRGEYNVYSTFQSHEPEFD
YLKSLEIEEKINKIKWLPRQNHAHFLLSTNDKTVKLWKVSERDKKWTGSSNLMGEDGILL
DPASITSVRLPKVEPMELMVEASPRRVFANAHTYHINSISVNSDGETYISADDLRINLWH
LGITDQSFNIVDIKPANMEDLTEVITAAEFHPKDCNLFVYSSSKGTIRVCDMRQSALCDQ
SARIFEEPEDPSNRSFFSEIISSISDVRFSHSGRFLISRDYLSVKVRQLFLDQCFEFSAC
LFMCFKKFEPPQLMKSIKRIMKLLNRGSVMPTFIVHPHRTHT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgatataatttcaacgtgtgaattcaaccacgatggtgaacttcttgcgaca
ggtgataaaggagggagagtagtaatctttcaacgagaagattcatcaagaaattccaca
ccaccaaggggtgaatacaatgtgtacagcaccttccaaagccacgagcctgaatttgac
tatctcaaaagtttagaaatagaagaaaaaattaataaaatcaaatggcttcccaggcaa
aatcacgcacatttccttctttcaacaaatgataaaactgtcaaattatggaaagtatct
gaaagggacaagaaatggacgggttcgtccaacctgatgggggaggatggaattctcctt
gatccagccagtatcacctccgtcaggttacccaaggtggaacccatggagctgatggtg
gaggcaagcccaaggagggtgtttgccaacgcacacacctaccacatcaactcaatatcc
gtcaatagtgatggcgaaacgtacatatcagcggatgatctccggattaacctctggcat
ctaggcatcaccgatcagagtttcaatattgtagatataaaaccagccaacatggaggat
ctaacagaggtcatcacggcggctgagttccatccaaaggattgtaatttatttgtgtat
agcagttccaaaggaactattagggtatgtgacatgcgccagtctgcactctgcgaccag
agcgctagaatctttgaagaaccggaggatccgagcaataggtcattcttttcagaaatt
atttcatcaatatcagatgtcaggtttagtcacagtggtagatttcttatatcaagagac
tatctttcagtaaaggtaagacaattatttttggaccaatgctttgaattctctgcttgc
cttttcatgtgcttcaagaaatttgaacctccacagttgatgaaatcaataaagcgcatc
atgaagctgttaaatagaggcagtgtgatgccaacattcatagtacacccacacagaaca
catacatga
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integrated database retrieval system
