Lytechinus pictus (painted urchin): 129273065
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Entry
129273065 CDS
T09066
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129273065
09122 Translation
03013 Nucleocytoplasmic transport
129273065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129273065
03041 Spliceosome [BR:
lpic03041
]
129273065
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129273065
Spliceosome [BR:
lpic03041
]
Complex C
Other components
EJC/TREX
129273065
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129273065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
WD40_RFWD3
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
NBCH_WD40
PAC11
Tricorn_2nd
B-prop_COPA_B_2nd
RMC1_N
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_SPT8
TRM82_WD
Beta-prop_DCAF12
Cytochrom_D1
Beta-prop_WDR41
Beta-prop_ELP1_1st
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_DCAF4
WD40_like
Motif
Other DBs
NCBI-GeneID:
129273065
NCBI-ProteinID:
XP_054766090
LinkDB
All DBs
Position
12:complement(30944326..30952689)
Genome browser
AA seq
321 aa
AA seq
DB search
MAASTENMIKKHFEKNCRTKEHNGVHSSKVHSVAWNCDGTMLASGSFDRNVCVFSLDRDR
MTREATYKGHVGSVDQLCWHPRNPDVFVTASGDKTIRIWDTRSAKSISTIATKGENINIC
WSPNEQYIAVGNKDDLVTFVDARSNRIISEEQFKYEVNEISWNNDSDLFFLTNGHGHINI
LSFPDLKPLQELSAHPANCICIEFDPTGRYFATGSADALVSLWDVAELVCVRTFSRLDWP
VRALSFSHDGQLLASASEDLIIDVAHVETGEKVTEVHCESPTFTVAWHPKRYLLAFACDD
KDKYNRERDAGSIKLFGLPSD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccacagaaaacatgattaaaaaacatttcgagaagaattgtcgaacaaaa
gaacataatggggttcactcatcgaaagttcactctgtagcatggaattgtgatggcact
atgcttgcatccggatcgtttgatagaaatgtttgtgtcttttcgctggatagagatagg
atgaccagagaagcaacgtacaagggtcatgtcggcagtgtggatcagttgtgctggcat
cccagaaatccagatgtgtttgtgaccgcatcgggagacaagacgatcaggatatgggat
accaggtctgccaagtctatatcaactatagctacaaagggtgagaacatcaacatttgc
tggagtcctaacgagcagtacattgccgtcggcaacaaggatgaccttgtgacctttgta
gatgctagatctaatcgtatcatcagcgaggaacaattcaagtatgaagtgaatgagatc
tcctggaacaacgacagtgatctcttcttcttaaccaatgggcatggtcacataaacatc
ctaagctttccagacctgaaacctctgcaggaactcagtgctcacccagccaactgcata
tgcattgagtttgatccaacgggaaggtactttgccactggaagtgccgatgccctggtg
agcctttgggatgttgccgagctggtttgtgtcaggaccttctcaaggttagactggcct
gtgcgtgccttgagcttcagccacgatgggcagctcttggcctctgcctctgaagatctc
atcatagatgtcgctcatgtcgaaacaggtgaaaaggtaacagaagtccactgcgaatcg
ccgaccttcactgtggcctggcaccccaagaggtacctgcttgcattcgcttgtgacgac
aaggacaagtataacagagagagggatgcaggtagcatcaaactgtttggattacccagt
gattga
DBGET
integrated database retrieval system