Lytechinus pictus (painted urchin): 129273209
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Entry
129273209 CDS
T09066
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129273209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129273209
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129273209
mRNA degradation factors
5'-3' decay
Lsm complex
129273209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129273209
NCBI-ProteinID:
XP_054766216
LinkDB
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Position
12:complement(5087175..5090574)
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AA seq
135 aa
AA seq
DB search
MATLICFLCCCCAFFLEKLLVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGKQYGDI
PRGVFVVRGENVVLLGEVDTENENNHNLEEVSIDEILEAQRAEQLKNQEEEKTRNKKLLE
RGLQPHGEQGIDEFP
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggctacactcatctgctttttgtgttgttgttgtgctttttttttagaaaagcttctg
gttgtcctaagagatggaaggaccctgataggtatccttagaagtattgatcaattcgcc
aatcttgtgttacatcgtaccattgagaggatacatgtaggcaaacagtatggagacata
ccaagaggtgtttttgttgtcagaggagagaatgtggtccttcttggtgaagtagataca
gagaatgagaataatcacaatttggaggaagtttctattgatgagatccttgaagcacaa
agagcagaacagctaaagaatcaagaggaagagaagacacggaataagaaacttttagag
agaggactccaacctcatggtgaacaaggaattgacgagtttccatga
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