Lytechinus pictus (painted urchin): 129273342
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Entry
129273342 CDS
T09066
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04130
SNARE interactions in vesicular transport
lpic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129273342
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129273342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129273342
Membrane trafficking [BR:
lpic04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
129273342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Aida_N
YhfM
Motif
Other DBs
NCBI-GeneID:
129273342
NCBI-ProteinID:
XP_054766337
LinkDB
All DBs
Position
12:complement(2189117..2199130)
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AA seq
198 aa
AA seq
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MKLFSIVVLYKGPTKVTILKSASDLSSFGYFQKSSVQEFMNFTSKIVVERTQQKMRASVK
EQDYIFHVMCKESNLSGVIISDGDYPPRVSFTLLNKILDEFASAVSPSTWGTVKENSANY
QGLESYLSKYQNPSEADPMMKIQKDLDDTKVIMHDTIESMLTRGEKLDDLVAKSDDLSAQ
SKTFYKTARKTNSCCVIQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattcagtatcgtcgtcctttacaaaggtcccaccaaagtgacaattttgaag
tcagcaagtgacttgtcttcttttggctattttcagaaatcaagtgttcaagagttcatg
aactttacaagcaaaattgttgtagaaagaacgcagcagaagatgcgcgcatctgtgaaa
gagcaagattacattttccatgtcatgtgtaaagaaagtaatctttcaggagttatcatc
tcagatggggattatcccccacgcgtttcatttacgctcttaaataagatactagatgag
tttgcaagtgctgtgtcaccatcaacatggggaacagtcaaagaaaatagtgcaaattat
caaggacttgaatcatatctttccaagtatcagaatccatcagaagcagatccaatgatg
aaaattcagaaagaccttgatgataccaaagttataatgcacgatacgatagaatcaatg
ctgacccgtggagagaagttagatgatctagtagcaaaatcagatgacttgagcgctcaa
tcaaagacattctacaaaacggcacggaaaacaaactcctgctgtgttatacagtaa
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