Lytechinus pictus (painted urchin): 129273450
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Entry
129273450 CDS
T09066
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129273450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129273450
03036 Chromosome and associated proteins [BR:
lpic03036
]
129273450
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129273450
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129273450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF6847
PPR_3
Motif
Other DBs
NCBI-GeneID:
129273450
NCBI-ProteinID:
XP_054766454
LinkDB
All DBs
Position
12:complement(8569811..8600964)
Genome browser
AA seq
994 aa
AA seq
DB search
MATLAAGKKNVRKKESAVRPPDRISGSFVEPGDTTMADIWKYSQRPDTSFDPQTMNRSID
QRRDDRRQTRHGDLSFSILDRSIEPREELRSNVLQNDRIRKSMGMLEQATGIQGTPAPGI
YPFNQSARTPGSEMKRRTYTPQKPPMTSEFDVSDMVGFTPARSFLTPSAKLSVSMGEPTR
NLQTSILSSPQYNDSVMDQTGMTMDMTRANLLLQEDPGQLATEGLFDEFLSAFKKHQSLT
DVFALVSEYEHLCHEQVTMLDRLMTKTLPSQKSFSRTLQVLRLLTQEKATWRLIGSLYQD
RQMSAEDQDGAGITLDRIHTEHLSEREIVDSLFERDAIIRQHQIVVDWLESIAADQSAFS
YNKVQFYSHSVCWENTLHELQQRAVSGSATRESLVTSLDPDAPVRENKPLADLDKEDEIK
LLLNVFANIRAGRLEEAQRLCKESGQAWRAASLEGWRLYHDRNMNSVENSGELAPIEGNT
YRDVWKNVCWRMAEDERFHLYERAIYAVLSGNLRELLPACNLWEDCLWAYFKVLVDQEVE
REIRDQLRSDRALQPLPQGYYTKDLTPPKIFQELHAHPNQKVESQAKEKLHLIQKYIILG
DIDTLLEEMSEWLREINPRPSHHLVRFMAHLALTLRSLGLSTRDEICISVIEAYVKDLIS
EEKTELVAIYVAQLPPDLQVMWYAKFLEGIHAKDQRQYCLQLAEDAGLDVAAITKKVVET
LRFKEDEEPGADIIRTAALEAATSQEDRRKIEAIDWLVFDPSQRAEAVKQCNAIIRIFLA
TKKHDAAREVFKKLPEDSIDVILRNWRAMAGSVPPPIQDANAIREYLCIKAYLDALDAYN
DWFAHYHNKKPSPPSLPEDANFHDRVRYEHEHKEYEMELERWEQSVLALTKGVSDTMYNV
LLFVDGGWMVDQTFDDDEEEVDEVRVSQMQRLRELCLPRMCLLLHSVLHSTHQYKDCLIL
ADVIASEQHKLYKVFSKPELKQVLSSLGSRHCNS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactcgcggcgggaaagaaaaatgtgcgaaagaaagaatcagctgttcgtcct
ccagaccgtatttccggttcttttgttgagccaggtgataccacaatggcagatatttgg
aagtattctcagcgtcctgacacctcctttgatcctcaaacaatgaaccggtctattgat
cagagaagagatgacagacgccaaacaagacatggtgatctctcatttagcattcttgac
agatcaatagaaccaagagaagaactaaggagcaatgtattacagaatgatcgcatcaga
aaatctatgggaatgttggagcaagccactgggatacaggggactcctgcaccaggaata
tatccattcaaccaatcagcgagaacacctggaagtgagatgaaaagaagaacatatact
cctcagaaaccacccatgacctcagagtttgatgtttcagatatggttggattcacacct
gcgagatcctttctcacaccttcagccaagctttccgtttccatgggtgagccgacacgc
aacctgcaaacctccatactgtccagtccacagtataatgactcggtgatggatcaaacg
ggaatgaccatggatatgacaagagctaatctcctattgcaagaagatccaggtcaacta
gcaactgaagggctgtttgatgaatttctaagtgccttcaagaaacatcaatccttgacc
gatgtctttgccttggtgtccgagtatgagcatctctgccatgaacaggtcactatgcta
gacagactcatgacaaaaacactacccagtcagaaaagcttttcacgcacgcttcaggta
cttcgtctcctgacccaggagaaagctacgtggcgtctgattggttcattgtatcaagac
cgacagatgtcagctgaagaccaagatggtgctggtatcactctcgacagaatccatact
gagcacctcagcgagagagaaattgtagactctttgtttgagagggacgccatcatcaga
cagcatcagattgtggtagattggttggaaagcatagcagcggatcagtctgcattctca
tacaacaaagtacagttctactcacattcagtttgctgggaaaataccctccatgaattg
cagcagagggcagtctctggttcggcaacgagagagtcgttggtgacctcacttgaccct
gacgcccctgtccgagagaacaaaccattggctgacctagacaaggaagatgagatcaag
ctgcttctcaatgtctttgccaacatccgggctgggaggttggaggaggcccaaaggctg
tgcaaagaatctggtcaagcgtggagggctgcgtcgctagagggttggaggttatatcat
gatcgcaatatgaactcagttgaaaactctggtgagcttgccccaatagagggcaacacg
tacagggacgtctggaagaatgtgtgctggagaatggcggaggatgagaggttccacctg
tatgagagggccatctatgctgtccttagtggaaacctgagagagttgctaccagcttgt
aacctttgggaagactgtctttgggcgtactttaaggttctagtcgaccaggaggtggag
agagagatccgggaccaactgagatcagacagggcacttcaacctttgcctcagggctat
tatacaaaagacctcacaccgcccaagattttccaagaacttcatgcacatcccaatcaa
aaagtggaatctcaggccaaggagaagcttcaccttattcagaagtacatcatactgggt
gatattgacaccctccttgaagaaatgagcgaatggttgagagagattaaccctcgtcct
tctcatcatctagtccgtttcatggctcatctagctttaacattgcgatctttaggactg
tcaaccagagatgagatatgtatctctgtcattgaggcctacgtcaaggatctgatttca
gaagagaagactgagctggttgctatatatgttgcacagcttccccctgatctccaggtc
atgtggtacgcaaagtttctggaaggtatccatgccaaggatcagaggcagtactgctta
caacttgctgaagatgcagggttggatgtagcagcaatcaccaagaaggtcgtagagacc
ctgagatttaaagaagacgaagagccaggtgcagatatcatacgcacggcagcactggaa
gcagctacatcacaggaggatcgcaggaagattgaggccatagactggttagtgtttgat
ccgtcacagagagctgaagccgtcaaacaatgcaatgccatcatcagaattttcctcgcc
actaagaagcatgatgctgccagggaagtctttaagaagcttccagaagactctattgat
gtgatcctcaggaattggagggccatggctggatctgttccacctcctatacaggatgcc
aatgctatcagagaatatctctgcatcaaagcctatctggatgccttggatgcatacaat
gattggtttgctcactaccacaataagaagcctagtcctccttccctaccagaggatgct
aactttcatgacagagtacgctatgaacacgagcacaaggaatacgagatggaactagag
agatgggaacagagtgtattagcgctcaccaagggtgtatccgataccatgtacaatgtg
cttctctttgtggacgggggatggatggtcgaccagactttcgatgatgatgaggaagaa
gttgatgaggttcgtgtaagtcagatgcagaggttacgagagctgtgcctgccgaggatg
tgccttctccttcactcggttcttcattccacacaccagtacaaggattgcctgatactg
gctgatgtcatcgcatcggagcagcacaagctttataaggtgttcagcaagcctgaattg
aaacaagttctctcgtccttagggagtcgtcactgcaactcttag
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