Lytechinus pictus (painted urchin): 129273583
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Entry
129273583 CDS
T09066
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129273583
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129273583
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
Pre-60S particles
Helicases
129273583
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Phage_YunG-like
FlgM
Motif
Other DBs
NCBI-GeneID:
129273583
NCBI-ProteinID:
XP_054766614
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Position
12:complement(16792896..16818778)
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AA seq
559 aa
AA seq
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MAASTHEKNVASFRGMGLDDRVLKALAKLGWSSPTLIQEKAIPLALEGKDILARARTGSG
KTAAYAIPLVQKILSSKETAREQATRALVLVPSRELCSQAYRNLQEISKCCSKEIRCADV
SGQVDLSAQRPLLMERPDIVLGTPSRILAHIQAKNLSLQRSLEMLVIDEADLVFSFGHEA
DMRALLSHFPKIYQAILMSATLSEDVKTLKKLVLHNPITLKLAESQLPEADRLSQYQIRC
IEEDKFLLIYTLLKLKLIRGKTIIFVNSIDRCYRLKLYLEQFSVAVCVLNSELPVNSRCH
IVNQFNTGLYDIIIASEESSLFEGRKTDETDEKKERKGKGHKGKQKKDKEYGVSRGIDFQ
NVCNVINFDFPESVKSYIHRVGRTARGEKMGTALSFVNEDEQNLLDNVEQELVGDDGTPL
VKPYQFKMSEIEGFRYRAKDAMRAVTRVAVREARVKEIKQEIFNSKKLKAFFEDNPRDLQ
LLRHDKVLHPAKVHSDLKNVPEYLVPKALRGTIPTTSRRRAPKRTAEGTVGQKKESRIAK
MKRKTEEDPLKSFKYKGKK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccactcatgaaaaaaatgtggcctcatttcgtggtatgggtttagatgat
cgcgtccttaaggcccttgcaaagcttggctggtctagtcctactctgattcaagagaaa
gctatacctcttgccttagaaggaaaggatatactggcccgggcaaggactggatctggc
aaaacagcagcctatgctatccctcttgttcaaaagatcctaagttcaaaagagacagct
agagaacaggcaactcgagctttggtcttggtaccctccagggaactctgttcacaggcc
tataggaatttacaggagatcagtaaatgttgctctaaagaaatccgatgtgctgatgtc
tccggtcaagtggatctgtcagcccagagaccccttcttatggagagaccggacatagtt
cttggcacacccagtcggatcttggcccacatccaggccaagaacttgtctctacagaga
tcccttgaaatgctcgttatcgacgaagcagacttagtcttttctttcggccatgaggcg
gacatgagggcactgctctctcatttcccaaagatttatcaagccatattgatgtcagct
acgttaagtgaagatgtaaagaccctcaagaaattggttttacacaatcctatcacactc
aaactggcagaatctcaacttccagaggcagaccgcctaagccagtatcaaataaggtgt
atagaagaggacaaatttctactcatctacacacttctgaaactcaagctaatcagaggc
aaaaccatcatctttgtcaactcgatagacaggtgttacagactgaaactgtatctcgag
cagttctcagtagctgtgtgtgtactgaactcagaattaccggtgaattcaaggtgccac
atcgtaaaccagttcaatactggcctttatgacatcatcatagcctccgaggaatctagt
ctctttgaaggacggaaaacggatgaaacagatgagaagaaagagaggaaaggaaagggt
cacaaaggaaagcaaaagaaagataaagagtatggagtgtcaagagggattgatttccag
aatgtctgtaatgttatcaactttgatttccctgagagtgtcaagtcttacatccacaga
gtgggaaggacagcaagaggagaaaagatgggaacagcgttatcatttgtaaatgaggat
gagcaaaatcttcttgataatgtagaacaagaacttgttggagatgatggaacaccttta
gtcaaaccgtatcagttcaagatgtccgagattgaaggatttagataccgtgccaaggat
gcaatgcgagcagtgacgagggtagcagttcgcgaagcccgggtgaaagagatcaaacag
gagatcttcaactccaagaaactcaaggccttctttgaagacaacccaagggacctacag
ctgttaagacacgacaaggtgttgcatcctgccaaggtccactcagatctcaagaatgta
ccagaataccttgtccccaaggcattgagaggtaccataccaactacaagcagacggaga
gctccaaagaggacagcagagggtactgtgggacagaagaaagagtctaggatagccaaa
atgaagaggaaaactgaagaagatccactgaagagcttcaaatacaagggaaagaaatga
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