Lytechinus pictus (painted urchin): 129274094
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Entry
129274094 CDS
T09066
Name
(RefSeq) integrin alpha-V-like
KO
K06584
integrin alpha 8
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04512
ECM-receptor interaction
lpic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129274094
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129274094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lpic04515
]
129274094
Cell adhesion molecules [BR:
lpic04515
]
Integrins
Integrin alpha subunits
129274094
BRITE hierarchy
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GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP_3
ITGAX-like_Ig_3
DUF11
Motif
Other DBs
NCBI-GeneID:
129274094
NCBI-ProteinID:
XP_054766926
LinkDB
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Position
13:complement(21227238..21276180)
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AA seq
1103 aa
AA seq
DB search
MSSSSPSSSTRGYVFAVASLCVAVCSRLAVVVEAFNVDTTNPLTFHHSDTESQFGLALTL
HREGGQNMLLVGAPRAVSSGYSQSMGIGRSGALFKCPIDTSTGVTNAESECQEIVVDTTG
NEYLSEDSTFQSTNATGQWLGSVVQSGGSDGSVVVCRPLYQFQEYQNEKIDRYLEGGCFV
INGGLTSPNSGLLDTAVKYNPCAGKDERVGYRKRYRCEFGGSAAARDARIVYGAPGSCLS
NGRFWYTAGSINADSALLSFPQGACAFKLDFEYYFGHALAFGNFRDGPSSAFEVAVGAPR
WKHGFARVFLYDDSLMEYDQLYASDLATYFGHALAASDLNNDGYDDLVVSAPMFTDEERS
IDAGWEVGKIFIYYNDQQGSFSVDNVDTIIGTGAGCRFGYSLAALGDINGDGFNDLAVGA
PFCEGGDVGKVFIYHGTGINLPLNLSPQQILNPSEQGTDLKYFGFVISAGYDIDQNDYPD
FAVGAHESQTALIYRSRAVVSTSAEIYVEENPINLDFKNMTTSNGISVAGFHVVICIQYS
GQGLPDNLNFTYDILLDSSKQLINRRTAFISNNVASLDGQTLSASLAGRTCATHDAYIRP
AIGDKQTPITLQLTHGLGEATQSSFAVQPILSNRATTVSINSLVFARDCEGETCYPDLGL
YTNVSTTQLMIGKAETFLVTVDVMNSGEDAFLSVLEIIEPPGLFFVSVQRSNTGTIVSTS
MKEWRSNQSRFMRASGQLSVVLELFSRYQRTPKSNSIMITVKLQYQTATYSSFSGPAVLN
LTARSTDAEKAGRDEDNFASVSIPVFASSSLVLSGNSIPDTLVIIEDSNETDSIGPPMSH
VIRLQNNGPSFIGPSTIEILWPIRLQDGTVLMSVADVSTETDMPCTSTPRINSGVSTENN
ITTFEDDVSNATIYTLWADCDSLPECLVIQCPLSSLGVGTDAAIIISVESMLLRDTVFAK
HFLHYIEVVSTASVTVNGTVYSGIPYSPHPTVSPLEIRTEIRVQYEKQRVIIQTTPIWIY
IVASICGLLILIIAIAILYKVKFFKRKQITEEQRDILQEHRKSVRRSRMSALDPDSPPPD
DALGMEKSPLQREGSVAGLIQEE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcatcgccgagctcatcgaccagggggtatgtcttcgccgttgcatcgtta
tgcgtggcagtctgttcgagattggccgtggtcgttgaggcattcaacgtcgatacaacg
aatcctttgacttttcaccacagcgatacagaaagtcagtttggcctcgcgctaacgctt
caccgggaaggtggccagaatatgctgttggtgggggctcctcgggccgtctcatcgggg
tattctcaaagcatgggcataggacggagtggcgccctcttcaagtgcccgattgataca
tctaccggagttaccaacgctgaatccgaatgccaagagattgtagtcgatactaccgga
aatgaatatctttctgaggattccaccttccagtcaacgaatgctactggtcagtggtta
gggagtgttgtacaaagtggaggctcggacgggtcagttgtggtttgcagaccgctgtat
cagtttcaagagtaccaaaacgaaaagattgaccgatacttagaaggtggttgtttcgtc
atcaatgggggtctgacgtcaccgaattcagggctgctggacacagccgtgaaatacaat
ccatgcgcaggaaaagatgaacgagttggatatcggaaaagataccgatgtgagtttggt
ggtagcgctgcagcaagagatgctcgtattgtttatggtgctccgggatcatgtttatcg
aatggtcgattttggtacacagcaggatcaataaatgctgattctgccttgttatccttt
ccgcagggagcatgtgcctttaagcttgattttgaatattactttggtcatgctcttgcg
tttggaaatttccgagacggtccctcctctgctttcgaggttgcagttggcgcaccgcga
tggaagcacggattcgcgcgggtgttcttgtatgacgattctctgatggagtatgatcaa
ctttatgccagtgatttagccacgtattttggtcacgccttggccgcttcggatctcaat
aatgatggatatgatgatctggttgtcagcgcgccaatgtttacagatgaggagaggtcg
atagacgctgggtgggaggtcggcaaaatcttcatttactataatgatcaacagggaagt
ttttctgtcgacaatgttgacacaatcattgggaccggtgcaggatgtcgttttggctat
tccttagcagccttgggtgatatcaatggagacggttttaatgatttggcggtgggggcg
cccttctgtgaaggtggtgatgttggcaaagttttcatttaccatggtactgggataaac
ttgcccctcaatctctcaccacaacagatcttgaatccttcagaacaaggaacagatctg
aagtactttggatttgtgatatcggccggatatgacatcgatcagaacgattacccagat
tttgccgttggcgctcacgagtctcaaactgctttaatatatcggtcgagagccgtggtg
tcgacaagcgcagaaatatatgttgaggaaaacccgataaatctggacttcaagaacatg
acaacttcaaatggcatctccgtagctgggttccatgtcgttatctgcattcagtatagt
ggacaagggttacctgataacttgaatttcacatacgatatcctcttggactcgtcaaag
caactgatcaaccgtcgaaccgccttcatcagtaacaacgtggcgagtcttgatggccag
actttaagtgcgtcactggcaggtcggacatgtgcgacgcacgatgcatatatccggcct
gcaattggggacaaacagaccccaataactcttcagcttacgcatggtctaggtgaggca
actcaatcaagctttgctgtgcaacccattttgtccaaccgggccaccacagtctctatt
aactcgcttgtctttgccagggattgtgagggcgaaacgtgttatccagatctcggtctt
tacaccaatgtttcgaccacgcagttgatgattggaaaggctgaaactttcttggttacg
gtcgacgtcatgaatagtggggaagacgctttcctatccgtactcgagatcatcgaacct
ccgggtctatttttcgtcagtgttcaacgatcgaacacaggtaccattgtgtcaacgtca
atgaaagagtggagaagcaaccaatcgaggtttatgagggcatctggccaactctcagtg
gtgctcgagctgttttcgagataccagaggacaccaaaatcaaattccataatgataact
gtaaaactacagtatcagacggctacctatagttctttctctggtcctgctgtcttgaat
ttgacggctcgcagtactgatgctgaaaaggcaggaagagatgaagataacttcgcaagt
gtttcaatcccagtctttgcatcatcctctctggtgctcagtggcaattcaattccagac
accctagtcattatcgaggatagcaatgaaacagacagtattgggccacccatgagtcac
gtgattcgattgcaaaacaacggccccagtttcatcggcccctccaccatcgagattcta
tggccgatcagactccaggacggcacggtcctaatgagtgtggccgacgtctccaccgaa
acagacatgccatgtacttctactccgagaataaacagcggcgtttcaacggagaacaac
atcaccacatttgaagacgacgttagcaatgctaccatctacacgttatgggccgattgc
gattcccttcccgaatgcttagtgatccagtgccctctgtcttcccttggcgtcgggacg
gacgccgccatcattatcagcgtagagtcgatgctgctgcgtgatacagtgttcgcaaaa
cattttctgcattacatagaggttgtttcaacagcatccgtcacggtcaatggtacggtg
tattctggtataccttattccccacaccccactgtttcacccctcgagatccggacagag
attagggtacagtatgagaagcaaagggttatcatccagaccacacctatatggatctac
atcgtcgcctctatatgtggtcttctcatcctcatcattgccatcgcaattctatataag
gtgaagttcttcaagcgcaagcagataactgaggaacagcgagatattctacaagaacat
cggaagagtgtccgaaggtccaggatgtccgcgctcgatcccgattccccacctcctgac
gacgccttgggtatggaaaaatcgcccttacaacgagaaggttctgtggctggtcttatt
caagaagaataa
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