Lytechinus pictus (painted urchin): 129274208
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Entry
129274208 CDS
T09066
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpic03000
]
129274208
04121 Ubiquitin system [BR:
lpic04121
]
129274208
Transcription factors [BR:
lpic03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129274208
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
129274208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
129274208
NCBI-ProteinID:
XP_054767023
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All DBs
Position
13:complement(29490288..29506782)
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AA seq
562 aa
AA seq
DB search
MGVNSAFLPYQAPKANVTVEDLAGKLIVKKKCQKPTPPMEAILIDEDLCTDPSTCLNKCE
KVFSCGGTDKHICEQTCHSGACPACEKTTNMKCRCGHRFVDVPCKDIQERSEVICDRKCT
RKKHCGRHKCGQICCVDTDHLCFQQCGRKLKCGIHSCEEPCHMGNCPPCLNASFDELTCH
CGQEILYPPIPCGTPPPECHQPCNRRHACQHPIRHHCHSEEKCPPCVELTSKTCIGGHEV
RYNIPCHLQGISCGRPCGKPLPCGYHNCLKTCHTGECDPECKQPCKVIRPDCGHPCGVTC
HVGWPCPQITCKSKVTVKCPCGRRVQMMECQASGSDGINKALQKLTVSKLAGKIQTLQRN
EDIDISELTGAKGSNKASRLLCDEECSLQERNKRLAVALQIKNPEMSPSNNTTQYGEFLK
EQARKHPGFVAAIEKEFAALVVSAQSSKQVSRSHAFPSMIKNHRRIIHEISEFYGCESES
YDEEPKRNVVTTARKNRCFMPNMTLTAMIQRELNPRAPLPIPHGSQENKLRSAAKAIKLS
TDVVSSSKTKKEKVIDYFDMTS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaatagcgcttttttgccttatcaagccccaaaagcgaatgttactgtggag
gatctagcggggaagttgattgtcaaaaagaagtgtcaaaaaccaacacccccaatggaa
gctattcttattgatgaggacctctgtacagacccatctacctgtcttaataagtgtgag
aaagtcttctcgtgtggtggaacagataagcacatctgtgagcagacttgccactctggc
gcttgtccagcatgtgagaagaccacaaacatgaaatgccgctgcggacatcgcttcgtt
gacgtcccttgcaaggatatacaggaaaggtcagaggtcatttgtgacaggaagtgtacc
aggaagaagcattgtgggagacataaatgtggtcagatatgttgtgtggatactgatcac
ctgtgcttccagcagtgtggacgcaagctcaagtgtggcattcactcttgtgaggaacca
tgtcatatgggaaactgcccaccttgtctcaatgcaagttttgatgaactaacgtgtcac
tgtggtcaggagatcctctacccccctatcccctgcggaaccccaccccctgaatgccat
cagccatgtaaccgtaggcatgcttgccagcatcccatacgtcatcactgccacagcgag
gagaaatgcccaccttgtgttgagcttaccagtaaaacctgtatcggaggccatgaggtc
cgctacaacattccgtgccacttgcaaggcatctcctgtggtcggccgtgtggtaagcca
ctgccttgtggttaccacaattgcctgaaaacttgtcatacgggagaatgtgatcctgaa
tgcaagcaaccttgtaaagtgatccgtccagattgcggtcatccatgtggtgtgacctgt
catgttggatggccttgtccacaaattacatgtaaatcaaaggtcactgtgaagtgtccg
tgtggaaggagagttcagatgatggaatgccaggctagtggtagcgatgggatcaacaag
gctttacagaaattgacggtgtctaagctagcgggtaagatccagacattacagcgtaat
gaagatattgatatcagtgagctcacgggtgccaagggatctaataaggccagcaggctt
ttgtgtgatgaagagtgttcactacaggaaagaaataaacgtcttgctgtcgcattgcag
atcaaaaaccctgaaatgagtccaagcaataatacaactcagtatggtgaatttctaaaa
gaacaagcgaggaagcacccaggctttgttgctgcgatagagaaggagtttgctgcgttg
gtcgtgtctgctcaaagttccaagcaggtaagtagaagccatgccttcccatccatgatc
aagaaccaccgtcgtatcatccatgagatatctgaattctacggctgtgaatcagaaagc
tatgatgaagaaccaaagaggaatgttgttactacagcaagaaagaaccgatgtttcatg
cctaacatgacattaacagcaatgatacagagagagctaaatcccagggcaccacttcct
atacctcatggcagtcaagaaaataaactcagatctgctgctaaggcaatcaaactttcc
actgacgttgtctcatctagtaagactaagaaggaaaaggttatagactactttgacatg
accagttag
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