Lytechinus pictus (painted urchin): 129274232
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Entry
129274232 CDS
T09066
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129274232
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
129274232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR35_TULP_N
MED16_beta-prop
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_VPS8
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR5
Motif
Other DBs
NCBI-GeneID:
129274232
NCBI-ProteinID:
XP_054767046
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Position
13:31508796..31577980
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AA seq
856 aa
AA seq
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MGSCTVCLYPVDAESAMFTAVERAEHIKKLIDDCVLSWSCRNTVAFTAIGNPKAPEEREV
YRPTIHIVDPDRPWEVCSFGSEHNDAIQALQWNSEGTQLLSADGSGSVYLWQMQHHLMND
WVCAAESHLPGEPVVAIAWLRNGMKITYNVDNIDSPNMLDKFSRTRFTPSLAEFGMRPTQ
GWVLVTGTGLVSVTVLKDGKTTVVTERLGNSRNHIALADIAFTSTGHILIATSDGGTRCP
LQCFKVTPAWKDDKLHLSTEYLPSLYMQCLCEITSRDKYPSITSVQFINKECTEQQLRSA
PTEQLLVCASGSMGSCIECWTLKKEAIPLHKLFQAGSPHHRDQPTTLKWVFSSTYSDSSI
ITSIALPKLPLKLSMNSLYNGPGMAIAVANQEGTIKLLHRSSLKPCAALRYEGIIKSEPG
PPAKRPNFNGKHLVCMEMSVTCCSMVAIDRTGALCMFKIEPTLGQGLDQGTVRVHTIAQV
VHLLEYCLVTGYDWWDLLLTITPNMVDTVLDRLSDSVNRQSSSTQELLFTRLVAVKASLY
RLSASGSGKAVDCYGKLLLHSTANVFKSLLRASAISSQDKGPAEKLSALCANSTETNPDT
LLKKLDSKEYVVEPATLQCLQPLIQWVADYTIVSLAAVPPPGSPTNRPGVSLMRDVPTLV
MLRELLLIIRMWGRLQKNCLPVFTTTADDPDVLIPSLFRLVSQIWVHYHDKQPTELDESL
IDECTLLPSQVGVPPWDLSPVTEGYTGKIHVRHGQSSFQFGTLPGRMISIATFSLGPEIY
TRSLTDRLHQKFDVVRKLSLGVTPHKEIRRCSRCSCISLMPPVTQQSSTVRVVWEKRWER
NCLCGGLWRKVTVHPA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttgtaccgtttgtctttatccagtagatgctgaatcagcaatgttcacagct
gtggaaagagcagaacatatcaagaagcttattgatgattgtgtactcagttggtcatgc
cggaacactgtagctttcacagccataggcaatcccaaagcacctgaagagagggaggtt
tacaggccaactatacacatcgtggatcctgataggccatgggaagtttgcagcttcggt
agcgagcacaacgatgccatccaagctttgcagtggaacagcgaggggacccagcttctc
tctgctgatggttcagggtctgtgtacctgtggcagatgcagcatcacttgatgaatgac
tgggtgtgtgctgctgaaagccatcttcctggtgagccagtcgttgctatcgcttggctg
cggaatggcatgaagatcacttacaatgttgacaatattgacagccctaacatgctggat
aagttctccaggacacgtttcactccaagcctggcggagtttggcatgaggccaacacaa
ggatgggtccttgtcacgggaactgggctggtttctgtaactgttcttaaagatgggaaa
acaaccgtcgtgacagagagacttgggaattcaagaaatcacattgctttggctgatatt
gccttcacaagtactgggcacattctgatagctacatcggatggaggtacaagatgtcct
ctccagtgttttaaagttaccccagcttggaaagatgataaactgcatttgtcaacagaa
tacctgccttctctatacatgcaatgcctgtgtgagatcaccagtagagataaatatcca
tctataacatctgttcagttcatcaacaaggaatgtacagaacaacagcttcggtcagcc
cccactgaacaactccttgtctgtgcttcgggttccatgggatcttgtatagaatgctgg
acattgaagaaggaggccataccattacacaaactattccaagcaggttctccacaccat
agagatcaacctacaacactgaaatgggtattcagttcaacctacagtgattcttccatc
atcacatccatcgctctaccaaagctacccctcaagctctctatgaactccctgtacaat
ggcccgggtatggctatagctgtagccaaccaagaaggcaccattaaactattacacagg
tcatctctcaagccttgtgcagcactgagatatgaaggaatcatcaaatccgaaccaggc
ccaccagctaaaagacccaacttcaatggcaagcacctagtatgtatggagatgtctgtt
acatgctgtagcatggtggctatagatcgaacaggcgccctctgtatgtttaagatcgaa
cctaccctgggccaaggcttagaccaaggtacagttcgagtgcataccatcgcccaggtg
gtacaccttctagaatactgtcttgtcactggctatgactggtgggatcttctgctgacg
atcactcccaatatggtggatacagtgttggataggctatctgactccgttaatagacaa
tctagttctacccaggagcttcttttcacaaggcttgttgctgtcaaggcaagcttgtac
aggctatctgctagtgggtccggcaaggcagttgactgttatggaaagctgcttctccat
tccactgcaaacgtcttcaaatcgttactccgggcaagtgccatctcttcacaagacaaa
gggccagcagagaaactcagtgctttgtgtgcaaacagcactgaaaccaaccctgacacg
ttgttaaagaaactagacagcaaggagtatgttgttgaaccagctaccttgcagtgtcta
cagccattgatccagtgggtagctgattacaccatagtgagtctagctgctgtaccccct
ccagggagccctaccaacagaccaggggtgagtttgatgcgagatgtacccactctagtg
atgctgagagaactccttcttatcatcaggatgtggggaagactacagaagaactgcctt
ccggtctttactactacagcagatgaccctgacgttctcataccaagcctctttcgactg
gtctctcaaatttgggttcactatcatgataagcaaccaacagaattagatgagtctctc
attgatgaatgcacactcttacctagtcaggttggtgttcctccatgggacctgtctcct
gttactgaaggctatacaggcaagatccacgtcagacatggccagtcatcgttccagttc
ggcacccttcccggtcgtatgatcagcatcgctactttcagtcttggtccggagatctac
acccgatccctgacggataggctccatcaaaagtttgacgtggtccgcaagctgagtctc
ggtgtaactccccacaaagagattaggagatgctcaaggtgttcctgtatatcattgatg
cctccagtaacccaacaatcatccacggtgagggtggtctgggagaaacgctgggagaga
aactgtttgtgcggaggtctgtggcggaaagtgacggttcatcctgcataa
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