Lytechinus pictus (painted urchin): 129274852
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Entry
129274852 CDS
T09066
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129274852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129274852
04121 Ubiquitin system [BR:
lpic04121
]
129274852
03036 Chromosome and associated proteins [BR:
lpic03036
]
129274852
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129274852
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
129274852
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129274852
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129274852
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
129274852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-RING_6
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-C3HC4_3
PTCB-BRCT
Prok-RING_4
zf-C3HC4_2
zf-C3HC4
LIG3_BRCT
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129274852
NCBI-ProteinID:
XP_054767566
LinkDB
All DBs
Position
13:1242323..1260128
Genome browser
AA seq
840 aa
AA seq
DB search
MFLSTKSALQQLEVSLQCSACHKLLTEPCTLGNCTHLICKACAGNYRGNACPTCQAPAWV
KDLQVKRELGMVVRLCRRLQRLINNDPEQVDSASIDLSEVAGPVRRGEGGRGLRKDDEGS
CVDGAPEIADDSETEPMSISESDTEFHKHGEIVRKALRSVQGSDTDSLSELERGKADSEI
GKKRRRVLQNARKKTDGDPDLMKHGIKTQGNQKPDNKGTGGSSKKASVNRQRNQKPNDEN
NPLSVYEFQASPPHPKTRKAKMQVIQQTKREARLRKVAAANKKWDSVSSVTGSRKEGRKH
VSFSDDSLKSGSSSAEDASKGDVKTSKAKTKYAAKTAVSSGESSRMKGKSVKDKEKTSPV
VSKLQNQKVKKSRVQITESLPDDASNLTPECSPSAPRAGQKRRSPSSSVSVTVKPSTPDS
AGKRKKTVEEHTPETPTSSSRTGQKKRLSGGRTSLSPNSSFSSPKTAVMKRNKRGETPLH
VACIKGDENEVKSLLEQGADPNSKDNAGWTPLHEACNHGHTSLLGLLLDHNALINTPGFE
HDTPLHDAVNNNRIPVIKYLRERGASLETRNIHGQTPLDLPATLAIKEALLTKPLLEVTN
SPVSTPVTAPSQHLQDRQVVLLGTGLKPKEKTSLVTCSDILEGRVVDEFSPDVTHLVAAC
EEDGRCLRTMKYMQAVLAGRWVVSSKWISECIKHEERVEEIEFEIPGTSSDPDSNTPRRG
RENVQKQFPGLFNGCHFFLKGSFKHPTPLKPELIQLIKLGGGTILQRQPKPDDDVIQVST
VVPYHARPNSQYASCSYYIVYDHLGKKPPPSVRTQKVCTVPVYWLLDCVSQFTILDPPKE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtcaaccaaaagtgcacttcagcagctggaagtttcccttcaatgctcagca
tgtcacaaacttcttacggagccatgcaccttgggaaactgtactcatcttatttgcaag
gcttgtgctggaaattaccgaggcaatgcatgccctacctgtcaggccccagcatgggta
aaggacttgcaggtcaagagagaattggggatggtggtccgtctctgtcgaagactccaa
cgactgatcaacaacgaccctgaacaagtagatagtgccagcatagatctgagcgaagtt
gctggtcctgttcggagaggggaaggtgggagagggttgagaaaggatgatgaaggttcc
tgtgtggatggggccccggagattgctgatgattctgaaacagagccgatgtctatctct
gaatcagacacagagtttcacaaacacggcgagattgtccgcaaggcccttcgctctgtt
caggggtcagacacagactcattatccgagctggaaagagggaaagctgacagtgaaatt
ggcaagaagagaagaagggtcctgcagaatgcgaggaagaagacagatggggatccagat
ttgatgaagcatggtataaagacacaaggaaatcagaaacctgataacaaaggaactggt
gggtcaagcaagaaagcttcagtcaacagacagagaaaccagaagcccaatgacgaaaac
aaccctttgtcagtgtatgaattccaggcctcgcctccacatccaaagacccgcaaagcg
aaaatgcaggtcattcaacagaccaaacgggaggcacgactgaggaaagtggctgcagca
aacaagaaatgggactctgtgtccagtgtcacaggatcgaggaaggaaggcagaaagcat
gtttctttttccgatgatagtttgaaatcaggatcaagtagtgctgaggatgcaagcaaa
ggtgatgtcaagacatccaaagcaaaaaccaaatatgctgcaaagaccgcagtttcttct
ggagagagtagtaggatgaagggcaagtctgtcaaagacaaagagaagacatcgcctgtt
gtctccaagcttcagaatcagaaagtaaaaaagtcaagggttcaaatcacagagtccttg
cctgatgatgcgtccaatttgacaccggaatgtagtccaagtgcgccacgagctggccaa
aaaagaagatcaccatcttcatcagtttcagtcacagtaaaaccttccaccccagacagt
gctggcaagaggaagaaaaccgtggaagaacatactccagagacccctaccagcagcagc
agaacaggtcaaaagaagagactttcaggagggaggacttcactgagcccaaattcatca
tttagttcaccaaagactgcagtgatgaagagaaacaagagaggggagactccactgcat
gtagcatgtattaaaggtgatgagaatgaagtcaagtcactcctggagcaaggagctgat
cctaactcaaaggacaatgcaggatggactcctctgcatgaagcctgcaaccacggtcat
acatccttactgggtctcctcctggatcataacgctctgattaacacacctgggtttgag
catgacacgccccttcatgatgcagtcaataacaacaggatacctgtcatcaaatacctc
agggaaagaggagcttcgctagaaacgaggaacattcacggtcaaacaccgctggaccta
cccgctactctagctatcaaggaagctcttcttaccaaacccctattagaggtcaccaat
tcacctgtctcaaccccagtaactgccccatcacaacatctacaagatagacaggtggtc
ctacttggaacaggcctaaagcccaaggaaaagacctccctggtgacttgcagtgatatc
ctagaaggaagagtagttgatgaattcagtcctgatgttacccatctagtagcagcatgt
gaggaggatggtagatgtctacgaaccatgaaatacatgcaggcagtactcgcaggacga
tgggtggtgtcttcaaagtggatttcagaatgcatcaaacatgaagagagagtagaggag
attgagtttgagattccaggaacatcctctgaccctgatagcaacacacctaggagagga
cgggaaaacgtccagaaacagtttccaggactgttcaacggctgtcacttctttttaaag
ggaagcttcaagcatccaacacctctcaaaccagaactcattcaactcatcaaactagga
ggaggaaccatcctccagcgtcaacctaaacctgatgatgatgtcatacaggtctcaacg
gttgttccttaccacgcacggccaaactcccagtatgcatcctgttcgtattacatcgtt
tatgaccatctggggaagaagccgccaccaagtgtcagaacgcagaaagtctgcactgta
ccagtatactggctgttggactgtgtgtctcaattcacgatactagatcctccaaaagaa
tga
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