Lytechinus pictus (painted urchin): 129274861
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Entry
129274861 CDS
T09066
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129274861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129274861
04121 Ubiquitin system [BR:
lpic04121
]
129274861
03036 Chromosome and associated proteins [BR:
lpic03036
]
129274861
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129274861
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
129274861
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129274861
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129274861
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
129274861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
zf-RING_6
BRCT_2
BRCT
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
Ank_KRIT1
zf-C3HC4
LIG3_BRCT
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129274861
NCBI-ProteinID:
XP_054767574
LinkDB
All DBs
Position
13:1532306..1558935
Genome browser
AA seq
840 aa
AA seq
DB search
MFLSTKSALQQLEVSLQCSACHKLLTEPCTLGNCTHLICKACAGNYRGNACPTCQAPAWV
KDLQVKRELGMVVRLCRRLQRLINNDPEQVDSASIDLSEVTGPVRTGEGGRSLGKEDEGS
CVNGGPEIADDSETEPMSISESDTEFHKHGGIVRKALRSVQGSDTDSLSELERGKADSEI
GKKRGRVLQNARKKTDGDPDLMKHGIKTQGNQKPDNKGTGGSSKKASVNRQRNQKPNDEN
NPLSVYEFQASPPHPKTRKAKLQVIQQTKREARLRKVAAANKKWDSVSSVTGSRKEGRKH
VSFSDDSLKSGSSSAEDASKGDVKTSKAKTKYVAKTAVSSGEGSRTKGKSVKDKEKTSPV
VSKLQNQKVKKSRVQITESLPDDASNVTPECSPSVPRAGQKRRSPSSTVSVTVKPSTPDS
AGKRKKMVEEHTPETPTSSSRTGQKKRLSGGRTSLSPNSSFSSPKTAVMKRNKRGETPLH
VACIKGDENEVKSLLEQGADPNSKDNAGWTPLHEACNHGHTSLLGLLLDHNALINTPGFE
HDTPLHDAVNNNRIPVIKYLRERGASLETRNIHGQTPLDLPATPAIKEALLTKPLLVVTN
SPVSSPVTAPSQHLQDRQVVLLGTGLKPKEKTFLVTCSDILEGRVVDEFSPDVTHLVAAC
EEDGRCLRTMKYMQAVLAGRWVVSSKWISECIKNEERVEEIEFEIPGTSSDPDSNTPRRG
RENVQKQFPGLFNGCHFFFKGSFKHPTPLKPELIQLIKLGGGTILQRQPKPDDDVIQVST
VVPYHARPNSQYASCAYYIVYDHLGKKSPPSVRTQKVCTVPVYWLLDCVSQFTILDPPKE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtcaaccaaaagtgcacttcagcagctggaagtttcccttcaatgctcagca
tgtcacaaacttcttacggagccatgcaccttgggaaactgtactcatcttatttgcaag
gcttgtgctggaaattaccgaggcaatgcatgccctacctgtcaggccccagcatgggta
aaggacttgcaggtcaagagagaattggggatggtggtccgtctctgtcgaagactccaa
cgactgatcaacaacgaccctgaacaagtagacagtgccagcatagatctgagcgaagtt
actggtcctgttcggacaggggaaggtgggagaagtttgggaaaggaggatgaaggttcc
tgtgtgaatgggggcccggagattgctgatgattctgaaacagagccaatgtctatctct
gaatcagacacagagtttcacaaacacggcgggattgtccgcaaggcccttcgctctgtt
caggggtcagacacagactcattatccgagctggaaagagggaaagctgacagtgaaatt
ggcaagaagagaggaagggtcctgcagaatgcgaggaagaagacagatggggatccagat
ttgatgaagcatggtataaagacacaaggaaatcagaaacctgataacaaaggaactggt
gggtcaagcaagaaagcttcagtcaacagacagagaaaccagaagcccaatgatgaaaac
aaccctttgtcagtgtatgaattccaggcctcgcctccacatccaaagacccgcaaagcg
aaactgcaggtcattcaacagaccaaacgggaggcacgactgaggaaagtggctgcagca
aacaagaaatgggactctgtgtccagtgtcacaggatcgaggaaggaaggcagaaagcat
gtttctttttccgatgatagtttgaaatcaggatcaagtagtgctgaggatgcaagcaaa
ggtgatgtcaagacatccaaagcaaaaaccaaatatgttgcaaagaccgcagtttcttct
ggagagggtagtaggacgaagggcaagtctgtcaaagacaaagagaagacatcgcctgtt
gtctccaagcttcagaatcagaaagtaaaaaagtcaagggttcaaatcacagagtccttg
cctgatgatgcgtccaatgtgacaccagaatgtagtccaagtgtgccacgagctggccag
aaaagaagatcaccatcttcaacagtttcagtcacagtaaaaccttccaccccagacagt
gctggcaagaggaagaaaatggtggaagagcatactccagagacccctaccagcagcagc
agaacaggtcaaaagaagaggctttcaggaggaaggacttcactaagcccaaattcatca
tttagttcaccaaagactgcagtgatgaagagaaacaagagaggggagactccactgcat
gtagcatgtattaaaggtgatgagaatgaagtcaagtctctcttggagcaaggagctgat
cctaactcaaaggacaatgcaggttggactcctctgcacgaagcctgcaaccacggtcat
acatccttactgggtctcctcctggatcataacgctctgatcaacacacctgggtttgag
catgacacgccccttcatgatgcagtcaataacaacaggataccagtcatcaaatacctc
agggaaagaggagcttcgctagaaacgaggaatattcacggtcaaacaccgctggaccta
cccgctactccagccatcaaggaagctcttcttaccaaacccctattagtggttaccaat
tcacctgtctcttccccagtaactgccccttcacaacatctacaagatagacaggtggtc
ctacttggaacaggcctaaagcccaaggaaaagaccttcctggtgacttgcagtgatatc
ttagaaggaagggtagttgatgaattcagtcctgatgttacccatctagtagcagcatgt
gaggaggatggtaggtgtctacgtaccatgaaatacatgcaggcagtacttgcaggacga
tgggtggtgtcttcaaagtggatttcagaatgcatcaaaaatgaagaaagagtagaggag
atagagtttgagattccgggaacatcctctgatcctgatagcaacacacctaggagagga
cgggaaaacgtccagaaacagtttccaggattgttcaacggctgtcacttcttttttaag
ggaagcttcaagcatccaacacctctcaaaccagaactcattcaactcatcaaactagga
ggaggaaccatcctccagcgtcaacctaaacctgatgatgatgtcatacaggtctcaacg
gtcgttccttaccacgcacggccaaactcccagtatgcatcctgtgcgtattacatcgtt
tatgaccatctggggaagaagtcgccaccaagtgtcagaacgcagaaagtctgcactgta
ccagtatactggctgttggactgtgtgtctcagttcacgatactagatcctccaaaagaa
tga
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