Lytechinus pictus (painted urchin): 129274889
Help
Entry
129274889 CDS
T09066
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4-like
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129274889
Enzymes [BR:
lpic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
129274889
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
129274889
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129274889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_3
Kelch_5
RAG2
Motif
Other DBs
NCBI-GeneID:
129274889
NCBI-ProteinID:
XP_054767607
LinkDB
All DBs
Position
13:complement(2374541..2392820)
Genome browser
AA seq
690 aa
AA seq
DB search
MEGKRIHHGVTIQNDVAVQGTNDSSIVSKCSVASLGYFKDTYLHHFVSKTSRRAPLINRG
YYIRARAIDDVLKAFLKMFGDSTNQIISLGAGFDSTYFRLQANGSLDNTVFYEVDFPQLV
KRKTALIRKKCELTELLLNPIYHSLLDSSGVCISSEKYHLLGVDLKHLDTLERVFKDIGV
DSVLPTLLLSECVITYIDTHSSDALIKWARGYFTHGQFVSYEQVLPDDPFGIVMQKHFKK
LNSPLNAIQKYTSKQKHCARFIQQGWDKSCAINMYEYYTQIISKDERIRVEQIELFDEFE
EWHLKCIHYILVAAFNGRCGEYRRNLFPELPLAPSIAEHTFVSDINPTVLVKPHPLQSTL
EATTWLRLFSHASVLIPDTSNIMISGGFGDSAGCHRRLDKVHMINIHLGNVIELHATQGS
EKLGPRLHHTMTALNSGQFLIFGGRTSPSKPCSIPYILTLQNTHHLPSYRLHTVQGGGVL
PSPRWRHTATPLTLAGREFVLVYGGRGVEEHPLGDTWLLDVEKIAWQRIHFEGGFTDARH
SHSATPWGNSYVVVTGGIGCDTTPLHSIVILNVETKSHTIQETIPSLKPRYSHTAHIIED
QLYLLGGVQPITDTPPSLTIIHLTTWALLEIRLKTYVECPLMLHNHTSHWLPDREGVLVI
GGGGNCFSFGTHLNQTPVIIEGILQYKSTR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaagcgaattcatcatggagtcaccattcaaaatgatgttgcggtccaaggg
accaatgacagcagcatcgttagcaagtgttctgtagcttcattgggatactttaaagat
acataccttcatcattttgtgtcaaagacgtcaaggagagcaccactgattaacagagga
tactatatcagagccagagctattgatgatgtcctaaaggcattccttaagatgtttgga
gattctacaaatcagatcatctcacttggggctggatttgactcaacatacttcagacta
caagctaatggttctttggacaacactgttttctatgaagttgattttcctcaactggtg
aaaagaaaaactgctttgataagaaaaaagtgtgaactgacggaattgcttcttaaccca
atctatcattcactgctagattcctctggtgtttgtatatcatctgagaagtaccatcta
cttggggttgacctgaagcatctggatactttagagagagtcttcaaggacattggtgtt
gactcagtattgcccaccctgcttctctctgagtgtgtcattacatacattgatactcac
agttcagatgctcttatcaagtgggctagaggctattttactcatggtcagtttgtttca
tatgaacaagttttgcctgatgatccttttggaattgtaatgcagaaacatttcaaaaag
ctgaactcaccactaaacgcgatacagaagtacaccagtaagcaaaaacactgtgccagg
tttatacaacagggttgggataaatcttgtgctattaacatgtatgaatactacacacaa
atcatctcaaaggatgaaaggataagagtggaacagattgagctatttgatgagtttgag
gagtggcatttgaaatgtattcactacatactagttgctgcattcaatggtagatgtggt
gaatacaggagaaatctctttccagaattgccattagcaccttcaatagcagagcatacc
ttcgtatctgatataaacccaacagtacttgtgaaaccacaccctctacagtctacttta
gaggctaccacctggttgaggctgttttcacatgccagtgtactgattccagacacaagt
aatattatgatctcgggagggttcggtgattcagcaggatgtcatagaaggttggacaag
gttcacatgattaatattcatcttggtaacgtcattgagctgcacgccactcaagggtct
gagaagttaggaccgagactccatcacaccatgacagccttaaactctggccaattcctc
atctttggtggtcgtacctctccttctaaaccttgttccatcccatacatcctcactcta
cagaacacccatcatctaccatcctatcggctacacactgtacagggaggaggggtgtta
ccatcccctaggtggaggcatacagctaccccattgactctagctggacgggagtttgtt
ctggtgtatggtggtaggggtgtagaagagcaccccttaggtgatacttggctcttagat
gtagagaagatagcatggcaaaggatccactttgaaggaggattcactgatgctagacat
tctcattctgccacaccttggggtaactcctatgtagtagtaactggtggtatagggtgt
gataccacacccctacactctatagtaatcctcaatgtagaaaccaagtcacataccatc
caagaaaccataccatcattaaaaccaaggtattcacatacagctcacataatagaagac
cagctgtatctcctgggtggggtgcaaccaatcactgataccccaccctcactaaccatc
atccatcttactacatgggctctacttgaaatcagattaaagacatatgttgaatgtcca
ttgatgcttcacaaccataccagtcattggctacctgacagagagggcgtccttgtcatt
ggaggcggaggaaattgcttctcttttggcacccatctgaaccaaactccagtaatcatt
gagggcatacttcaatataagtcaaccaggtag
DBGET
integrated database retrieval system
