Lytechinus pictus (painted urchin): 129274968
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Entry
129274968 CDS
T09066
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129274968
04121 Ubiquitin system [BR:
lpic04121
]
129274968
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Other 90S particles
129274968
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129274968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
eIF2A
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_WDR35_TULP_N
MIOS_WD40
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
129274968
NCBI-ProteinID:
XP_054767695
LinkDB
All DBs
Position
13:11295603..11310108
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AA seq
446 aa
AA seq
DB search
MVKVKVLSRNPDDYVRETKHDIHKVPRNYDPSLHPFEAPREYMRALNATKLERVFAKPFL
GSLEGHTDSVHCLRKHPTNLSTVASGGCDGTVRLWDLSTRACQRTINAHKGFVRGLCMDK
TGQFLFTVGDDKTIKKWRTFPRMNDTSQEPLNTIIGKNMFISIDHHWKDTTYATCGSKVD
IWDETHADPIRSYSWGSDSIHSIKFNPVETYMLGSCTQDRNIILYDMRGAAPLRKVVMEM
RTNTIAWNPMEAFVFTAANEDYNLYTFDMRMLKTALNVHMDHVSAVVDVDYSPTGKEFVT
GSFDKTIRIYAADKGHSREIYHTKRMQHVSCVRWSLDNKYILSGSDEMNIRIWKANASEK
LGKLNRREEASTLYNSKLKEKFQHHPQVKRISRHRHVPNMVYKETKTIRIQKESRKRKEH
NRRKHSKPGTVPFKAERKKHILSEVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagtgaaggttctgagtagaaatccagatgattacgtccgagaaactaagcat
gatatacacaaagttcctcgtaattacgacccttccctgcacccgtttgaggcaccaaga
gagtatatgagagctttgaatgctaccaaattggagagagtgtttgcaaagccttttctg
gggtcactggaaggtcacaccgattctgttcattgcctcagaaaacatccaaccaattta
tcaactgtggcctcaggtggatgcgatggcacggtcagactttgggatctctcaacaaga
gcttgtcaaagaactatcaatgcacacaaaggtttcgtgagagggctgtgtatggataag
actggccagttcttattcacagttggagatgacaaaactatcaagaaatggaggacgttc
ccgagaatgaacgacacaagccaagaacctttgaacactattattggaaagaatatgttc
atctcaattgatcaccactggaaggatactacgtacgctacgtgcgggtcaaaggtcgac
atctgggatgagacgcatgctgaccccatccggtcatactcgtgggggtctgatagtata
cacagcatcaaattcaacccagtcgagacgtacatgctgggtagctgcacgcaggatagg
aacatcattctttacgacatgagaggggcggcaccactcaggaaggtcgtcatggagatg
agaacaaacacaattgcctggaatccgatggaggctttcgttttcactgcagctaatgaa
gattataacttatacacatttgacatgagaatgttaaagactgccctcaatgttcacatg
gaccacgtctcggcggttgtggacgtagattactcaccgacaggcaaggagtttgtgact
ggcagctttgataagaccatcaggatctatgctgcggataaagggcacagtcgtgagata
taccataccaaacgcatgcaacatgtaagctgtgtcagatggagtcttgataacaagtat
atcctcagtggatccgatgagatgaatatcagaatatggaaggccaacgcttcagagaaa
cttggaaagctgaatcgaagagaagaagcttccaccctgtacaattccaaactaaaagag
aagttccaacatcatcctcaggttaagagaatcagcagacatcgtcatgtacctaatatg
gtctataaggagaccaagacaatacgcatacagaaggaatcaagaaaacgaaaggagcac
aaccgaagaaaacacagcaagccaggaacagtgccatttaaagcagaaaggaagaaacat
atcctatcagaagttgaatga
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