Lytechinus pictus (painted urchin): 129274981
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Entry
129274981 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2-like
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129274981
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129274981
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129274981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
SWIM
zf-C3HC4_2
zf-C3HC4
zf-rbx1
ZZ
zf-RING_16
zf-RING_UBOX
zf-ANAPC11
zf-RING-like
RINGv
FANCL_C
Motif
Other DBs
NCBI-GeneID:
129274981
NCBI-ProteinID:
XP_054767712
LinkDB
All DBs
Position
13:complement(12334029..12346722)
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AA seq
726 aa
AA seq
DB search
MAIRSVPWQRSVSDAVSWHQDQALSATIYILRETGPTGFLLKEEGESKKVKVFLGDPHKC
TCTTFRKEKDLCKHICWVLLKKFRLERNNELSYQRGLVEREINAVLRGLAKKEDPRRRAA
AARLARNAGKGETSYSHSDGKEALQQREITEDDVCPICQDELLGNREPVTFCRFGCAKSI
HIKCMKVWADHQKSTGETVLKCPLCREDFGQIDILEAEYRNSSLQKTRAECADIHMGKAC
AACNQSPISGKCYKCTECRDLYLCQNCFVSNAHSNHSFQFRQKSNQRWRPAQRGSGGALP
TAVISDLENRDITDEDYDTLLQLDNPASNQLSNVPEHVVKSFHVETVREGSNLLSLGTQC
RVCLRAYTIGQLVKKLPCRHKFHAACIDQWLLHEHPTCPVDGTAVWNPHSEQTRPGKKNK
KTNQGNEGRTEGGDTVLQIGPGSGVVKLQGSDSAGRQRGRAGHGRETDSTEVGLTSDFQL
MGSSFAKPALPNRSTPDRHGMLQQNSDPTHTTPLHRSHSHEALIDTTSPSTYRASPLRTL
NIGDVNGPTTTSRQTGVVRHRPPARPASLDRHRTHVASIPLRREEVMSPVRGHGSSDVSV
PRLPVENGLHSPQDGVRERGREADGRRRRVGSFGRNRSSSRERPHRQQDDIPQNAESLFL
GSSSGQLIGSSKPSSSNSVGSHHHHHPRSKVKPLLTNKHASPSRDSADLALAGSAMNNLN
ISGFGD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacggagcgtaccatggcagaggtctgtgtccgacgccgtctcatggcaccag
gaccaagctctgtcggctaccatctacatcctcagggaaacgggtccgacagggttccta
ctcaaggaggaaggagagtccaaaaaagtcaaggtatttctcggagatcctcacaagtgt
acgtgtactaccttcaggaaggagaaggatctttgcaaacatatttgttgggtactgctg
aagaaatttcgtctggaaaggaataatgaattatcctaccaaagaggcctggtggagcgt
gagatcaacgctgttctgaggggtctcgcaaagaaggaggaccctcggaggcgggcggcg
gcggctcggcttgcgaggaatgcaggcaaaggggagacatcttactctcattctgatggg
aaggaagcgttacagcagagggagatcaccgaggatgatgtctgccccatttgtcaagat
gaactccttggaaacagagagccagtcacattttgcaggtttggttgtgccaagagcatt
cacatcaaatgcatgaaggtatgggcggaccatcagaagtccaccggcgagacagtcctg
aagtgccccctctgtagggaagatttcggtcagatcgacatcttggaggcggagtatcgc
aactcgtctttacaaaagacgagagcggagtgcgccgatatccatatgggcaaggcatgt
gctgcctgtaaccagtcacctatctcaggcaaatgttacaaatgcacagaatgcagagac
ctctacttgtgtcagaactgctttgtatctaatgctcattcaaaccactcattccagttt
aggcagaaaagtaaccagagatggcgtcctgctcaacgaggatcaggaggagctctgcca
acagcggtcatatcggatcttgagaacagagatatcacggatgaagattatgatactcta
ctgcagcttgataatcccgcatccaaccagctaagcaatgtccctgagcatgtggtgaag
tctttccatgtcgagacggtccgagaaggcagtaacctcctgtctttgggcacccagtgc
agagtgtgcttgagagcctacaccatcggacaacttgtcaagaaactcccttgcaggcat
aagttccacgcagcgtgcatagaccagtggttgctgcacgagcacccaacatgccctgtg
gatgggacggcggtctggaacccccactcggagcagaccagacctggcaagaagaacaag
aagaccaaccaggggaacgagggtaggacggaaggaggggatactgtccttcagatcggt
ccaggatcgggagtcgtcaagctccaagggagcgattctgcagggaggcagaggggaagg
gcagggcatggtagggaaacggactccacagaggttggacttacatcggacttccagctt
atgggctcgtccttcgcaaagcctgcgctaccaaacaggtctactcctgatcggcatgga
atgcttcaacagaactctgatcccacccacaccacccccctgcatagatcacattcacac
gaagccctcatcgataccacctcaccgtcaacttaccgtgcatctcccctgaggactctg
aatataggtgacgtcaacggaccgaccaccacctccaggcaaacgggtgtggtcagacac
cgaccccccgccagacctgcttctctggacagacatagaactcatgttgcttccattcct
ctgcggagggaggaggtcatgtctcctgtcagaggacacggcagcagcgatgtgtcggtc
ccgaggcttcctgtagagaatggtcttcactcgcctcaggatggcgtcagagagaggggt
cgagaggccgatgggcggaggagaagggtcgggagcttcggcaggaatcgctcttcgtcg
agagaaaggccacaccgccaacaagatgacataccacagaatgcagagtccctcttcctt
ggctcaagcagcggacagctgattggctcttccaagccatcgtcctcaaactcggtgggc
agccatcaccatcatcatccgaggtcaaaggtaaagccactattgaccaataagcatgcc
agcccaagcagagactcggcggaccttgctctcgcaggcagtgccatgaacaatctaaat
ataagtgggttcggtgactga
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