Lytechinus pictus (painted urchin): 129275139
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Entry
129275139 CDS
T09066
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129275139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129275139
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129275139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
129275139
NCBI-ProteinID:
XP_054767901
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Position
13:complement(28152384..28164684)
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AA seq
312 aa
AA seq
DB search
MHGLGMQPRLGGAAIPPPQAPSSIPPMAPVEREKIYQWIVELASPDTRENALHELSKKRE
VVPDLAPMLWHSFGTVAALLQEIVNIYPYINPPALTAHQSNRVCNALALLQCIASHPETR
SAFLQAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLC
LRIMESGSELSKTVATFILQKILLDETGLSYICQTYERFSHVAMILGKMVIALAKEPSAR
LLKHVVRCYLRLSDNQRARGALRQCLPDQLKDNSFMAVLKDDGSTKRWLAQLIKNLTETS
SMDPRGIPMPPQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtcttgggatgcaaccgcgtcttggaggagctgcaatcccccctccccaagcg
ccttcctccatccctcccatggcaccggtggagagagagaagatctaccagtggattgtg
gagctagcgagtccagacacaagggaaaatgcactacacgaattaagtaaaaagcgtgag
gtggttccagacctggcccccatgctgtggcactccttcggtacagtggctgcactgctt
caagagattgtcaacatctatccatacatcaacccaccagctctcacagcccaccagtcc
aatcgagtgtgcaatgccctggctctgttacaatgcatagcatcacatccagagacaaga
tcagcattcttacaagcgcacatccctttgtttctctaccccttcttacacaccgtcagc
aagacacgcccatttgagtacctacgcctcacgagtcttggtgtcataggtgctcttgtc
aagactgatgaacaggaggttataaatttcttactgacgacagagattatcccactctgt
ctcaggataatggagagtggcagtgaactttcaaaaacagttgctaccttcatactacag
aagattcttctagatgaaacgggtctttcctacatctgtcagacgtatgaaagattctcc
cacgtagcaatgatactaggcaagatggtgatagcactggcgaaagaaccgtcagcgaga
ctcttgaagcatgttgtcagatgctacctcagactttcagataaccaaagagcccgcggt
gcactccggcagtgcctcccagaccagctcaaggacaacagcttcatggccgtcctcaag
gacgacggctccaccaaacgctggctggcccagctcatcaagaaccttaccgagaccagc
tccatggacccccggggaatccccatgccgccacaatga
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