Lytechinus pictus (painted urchin): 129275161
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Entry
129275161 CDS
T09066
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129275161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129275161
Spliceosome [BR:
lpic03041
]
Complex A
U1 snRNP components
U1 related factors
129275161
Complex B
129275161
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
129275161
NCBI-ProteinID:
XP_054767924
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All DBs
Position
13:29151105..29182579
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AA seq
996 aa
AA seq
DB search
MSGPGNQPPAGGNPPFNPQGPMMMPPFGGPGMPPPPFPMPGQGPPPSGGPPTQGGPGPGG
GPPMNMPPPNFGQPPPGMPPMPPPMGMPPPGWPNAPNMGMPPMMPPGFPPGMFPPVVPPT
VPPVSTMPSAKTISAETTATTAASAPTGSASGSETTAKPSSSGDNKPSESKPTLKDTVQG
GGDESQAKKKKSQWTEHKAPDGRTYYYNNNTKQSKWEKPDDLKTRAEILLSECPWKEFKS
DSGKLYFHNSQTKESKWTIPKDLEDLKARIEADGLDKVIPNSPDGSDTTSSDKPQTEEAA
AKQEARETPPSQAETTQPATTVPAATTAGTGAALDPSAMMGIPLPGVPMPSVPPGILPFM
AAQGMVPGATPKTDEDAGSASESQPDTPELKEVVYNTKEEAKDAFKQLLRERSVPSTANW
DQAMRLIVNDPRYKALTKLSEKKQVFNNWKVQRGKEEKEEQRLKAKKAKEELQEYLQQHP
KMTSTTRYRKADAMFEDEEIWRVVPDRDRKDLYDDVIFFLSKKEKEEAKVLRKRNIEAMN
NILDSMPNVTFRTTWSECQRYLAENPSFAEDDELMSMDKEDALICFEEHIRQMEKEEEEE
LERAKMLKKRHFRKCREAFLVLLDELHDRGQLHSMALWMDLYPIVSADPRFNSMLGKPGS
TPLDLFKFYVDDLKARFHDEKKIVKDILKDRNLTVELTTSFDDFASTISTDKRASTLDAG
NIKMAFNSLIEKAEAREKERQKEEARKQRRKESAFKTMLKQSAPPLDVNSNWDDVRDRFV
NDHAFDGITVESERIRLFKEFITSLEAACAHHHGKSSSRKHSKKSKKHRSRRSPSKSSDS
DDEQDERERERERERERERERERERERERERERERERERERERDSHKRSKKKKRSKTPSD
SSGHESDHSKSKTSKRHKKKTKKKRRRTPASDSGTDEKESGEISVPHKPSKSATPSMSTE
TPKKEKTGWDTSDSELSEGELERRRRALLEQLAENH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaccagggaaccagccaccggctggggggaatccccctttcaaccctcaaggt
ccgatgatgatgccaccatttggggggccagggatgcccccaccaccattccccatgcca
ggtcaggggcctcccccatcaggtgggcctccgacacagggagggccaggacccggggga
ggacccccgatgaacatgccgccaccaaactttgggcaaccccctcccggaatgcctcct
atgcctcctcccatgggcatgccgccccctggatggcccaacgcacccaacatgggcatg
ccccctatgatgccaccaggcttccctccaggaatgtttccacccgttgtgcctcctaca
gtaccacctgtatctaccatgccatcggctaaaacaatctctgcagaaacaaccgccact
actgctgcatcagccccaacaggaagtgcttcaggttcagagacgactgctaagccttcg
tcatctggtgacaacaaacctagtgagagtaaaccaactctgaaggatacagtccaggga
gggggagacgaatcacaagctaagaaaaagaagagccagtggacagagcacaaagcacca
gacggaaggacgtactactataacaataataccaagcaatccaagtgggaaaaacctgat
gacctcaagacaagggccgaaatccttttgtctgaatgtccttggaaggaatttaaatcg
gattccgggaagttgtacttccataacagtcaaaccaaggagtctaagtggactataccc
aaagatttggaagatttgaaagctcggattgaagcagatggtctagacaaggtgatcccg
aactctcctgatggctccgataccacatcatcagacaaaccccaaactgaagaagcagct
gcaaagcaagaggcgcgggaaacgcccccttcccaggccgagaccacccagccagctaca
actgtaccagcagccactacagcagggacaggggctgctttggacccctcagccatgatg
gggattcccctcccgggggtacccatgcccagtgttccgccgggtatcctaccattcatg
gcggcacagggaatggtgcccggtgccactccaaagacggatgaggacgctggaagtgca
tcagagtctcaaccagacacaccagaactaaaagaagtagtttacaacacaaaggaagaa
gcaaaggatgcttttaaacaacttctcagggaaaggagcgttccatcgacagcaaactgg
gaccaggccatgagactgatagtaaatgatcctcgatacaaagctcttaccaaattgagt
gagaagaaacaagtattcaacaattggaaagtacaaagaggcaaggaagaaaaggaggaa
cagcgattgaaagccaagaaggcaaaggaagaacttcaagagtatctccaacaacatcct
aaaatgacttctactactagatacaggaaagcagacgccatgttcgaggatgaggaaatc
tggagagtggtacccgatcgggatcggaaggacctctatgacgatgtcatcttcttcttg
agcaagaaggagaaggaagaggcaaaggtgttgcgcaagagaaacattgaggcgatgaac
aacattcttgatagtatgccgaacgtgacgttccgtacgacgtggtccgagtgccagcgc
tatctggctgagaatccatcgtttgctgaagatgatgagcttatgagcatggacaaagag
gatgcattgatctgttttgaggaacacattcgtcagatggagaaggaggaagaagaagag
ttagagagagctaagatgctgaagaagagacacttccgaaagtgcagagaagcatttctg
gttcttcttgatgaattgcacgatagaggtcagcttcactccatggctctgtggatggat
ctatatccaatcgtcagtgctgatcctcgcttcaatagcatgctgggtaaaccagggtca
acgccccttgacctctttaagttctacgttgatgacctcaaggcccgtttccatgacgag
aagaaaatcgtcaaggacattctcaaggataggaacttgacagtggaactcacaacaagt
tttgatgactttgccagcactatcagcacagacaagagggcatccaccttagatgcagga
aacatcaagatggcattcaatagtttgatagagaaagcagaagcaagggagaaggagaga
cagaaagaagaagccaggaaacagagaaggaaagagagtgccttcaagacgatgctcaaa
caatcagctccaccccttgatgtcaactcaaactgggatgatgtacgagatcgctttgtc
aacgaccatgcattcgatggaatcaccgttgaatcagaaaggatccgtctgttcaaggaa
ttcatcacttcactcgaagctgcttgtgcccatcaccatgggaagtcttcatctcggaag
cattctaagaaatcaaagaaacatcgcagcaggcgatctccatccaaatcgtccgattct
gatgatgaacaggatgaaagagagagggaaagggagagagagcgtgaaagagagagggag
agggaacgagaacgtgagagagagagggaaagagagagagaaagggagagagaaagagaa
agagagagagacagtcacaaacgctctaagaagaagaaacgttcaaagacaccatcggat
tcatctggtcatgaatcagatcatagtaagagcaagacttccaagaggcacaagaagaaa
accaagaagaagcgcaggagaacgcctgcatctgattccggtacggacgagaaggaaagc
ggtgagatatcagttcctcataagccaagcaagtcagcaacaccatccatgtctacagaa
acacccaagaaagaaaagactggctgggacacctccgacagtgaattaagcgagggagag
ttggaaaggcggagaagagcattactggaacagctggctgagaatcattga
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