Lytechinus pictus (painted urchin): 129276525
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Entry
129276525 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MIB2-like
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129276525
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129276525
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129276525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
SH3_15
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
Sina_RING
zf-RING_UBOX
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129276525
NCBI-ProteinID:
XP_054768878
LinkDB
All DBs
Position
14:complement(14055716..14089044)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAVNVGVRVVRGPEWKWGNQDDGDGHLGTIVEIGRQGSSTSPDKTVVVQWDCGTRTNYRV
GYQGAYDLLLYDNAPAGVKHQNITCNGCKQEGILGMRWKCISCEDYDLCSVCYFAGKHDP
NHEFIRLVTQSSAGTRVSKRQNCAKTQVRGLLPGARVVRGADWDWGDQDGGDGKAGNIIN
IRGWEQESGRSVANVTWGTSLTNVYRIGHKGKVDLKYTKDAAGGYYYKDHLPKLGEIGEQ
NPQRATTDEPTVTFCVGDKVKVILTVDVLKAMQEGHGGWNPKMAEYVGKIGLVHRVTDRG
DIRVTYPGCGTRWTFHPAALSKVNSYAVGDEVTILSDMALVKRLQPGHGEWSEGMGATLG
KNGKILKIYSDGDLRVSVDKQVWTFNPACLTPLERSNKPDLNNTMTADRAEELQGNLHEL
LQEILTLRTPNESPDKLVSEAAQGNKRVVTELVAKHPEWVNARVSGKTALQVASHQGHLE
VIKVLSLGKASMELQDQDGDTALHYAVFGKQPDIVEYLISKNADMNVVNKGNCSSLHVAV
NKGFVDCVRVLLRHRCNPNLQDLYGDTALHDAIAKDNRDIIDLLVEAHGADLSLKNRRGF
NVLHHAALKGNNYATEKLVTKARQLVNLKKDDGYAALHLAALNGHRDVVETLLVQGHGDM
NVRNNRRQTPLILAAGQGHTHVIELLVTKGAEVSAEDEDGDTSLHLALVRQEVYAERDDS
PFIQLYRTKIVSGLVVNMAIATVCFLVKAGGSLTHRNHQSKSPLDLVLDIKIKNYLLQLY
DQRRQKQRHDKDSKQGRRQRSASQERLLASRGDTPGTSQNVRGPSTPAGPSTPAGPPAPA
GPSTPAGPPAPVEGPSGDSPANLEAIMSDCRMCEKPANCQFKPCGHQVACMDCAALFQKC
YSCKAEVKDRVKVEERKCAICLTNKAEITLVPCGHRNVCRGCCNKVKSCSTCKQPVREML
DKAGHRITISSPSASSSSQHHHQRPSSSKQGAKSSQAASTSGSSTPRGASSSSGRVSKEE
ELKRLKEQYQQMEEEVLCPICMETKRNVVFLCGHSVCKKCSRSLKQCPLCRKPITKKIVL
FN
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaatgtcggggtaagagtagtccgagggccagaatggaagtggggcaaccag
gatgacggcgatggtcatctagggacaatcgtagagatcggtcgccaggggagcagtacg
tcgccggacaagacagtcgtcgtacaatgggattgcgggacaaggaccaactacagagtg
ggctatcagggagcgtatgatctgcttctatatgataatgctcctgcaggagtaaagcat
caaaacatcacatgtaacggatgtaaacaggaagggatcctaggtatgaggtggaaatgt
atatcttgtgaagactacgatctctgctctgtctgctactttgctggaaagcacgaccca
aatcatgagttcatcaggctggtcacccaaagctcagcaggcactcgtgtatccaaacgg
cagaactgtgcaaagactcaggtcaggggtctacttcctggcgccagggtcgtcagaggt
gcagactgggattggggtgaccaagatggcggagacggaaaagcagggaatatcatcaat
atccgtggttgggagcaggaatcgggccgtagcgttgccaacgtgacgtgggggactagt
ctgaccaacgtctatcggataggtcacaagggaaaggtggatctcaaatataccaaggat
gcagccggaggttactactacaaggatcacctccctaaacttggtgagattggagagcag
aacccccagagagcaaccactgatgaaccgaccgtgaccttctgcgttggtgacaaggtc
aaggtcattctcaccgttgacgtcctcaaggccatgcaggaaggtcacggtggatggaac
cctaagatggcagagtatgttggtaagattggtctggtccatcgtgttactgatcgagga
gatattcgtgtgacctacccgggctgtggtacaagatggacctttcatccagctgctcta
agcaaggtgaattcctatgctgtaggtgatgaagtgaccattctatctgacatggcgttg
gtcaagagattacaacctggtcatggggaatggagtgaaggcatgggagcaactctcggc
aagaatgggaagatcctcaagatctactctgatggtgaccttcgtgtgtcggtggacaaa
caagtctggacgttcaaccctgcttgcttgactcctcttgagaggtcaaataaacctgac
ctgaataacaccatgacggcggacagagctgaagaattacaaggtaacctgcatgagctc
ttgcaggagatcttaaccctgagaaccccaaatgaaagtcctgacaagttggttagtgaa
gctgcacagggaaacaagagagtcgtcacagagcttgtagcgaaacatccggaatgggtg
aacgcacgggtttctgggaagactgctttgcaggtagctagtcaccaaggtcatctggag
gtcatcaaggttcttagtctcggcaaagcctcgatggaactccaggatcaagatggcgat
actgcactccactacgctgtctttggcaaacagccggacattgtggagtatctgatcagc
aagaatgcggacatgaacgttgtcaacaagggtaactgtagtagtctgcatgtagcggtc
aataaaggctttgttgactgtgtccgggtgctactcaggcataggtgtaatcctaatcta
caggacctatatggtgacactgcactccacgacgccatcgcgaaagacaaccgcgacatc
atcgatctcctagtcgaggctcacggagcagacctgagcctcaagaacaggagaggattt
aatgttcttcatcatgctgctctcaagggcaataactatgccactgagaaattggtaacc
aaggccagacagcttgtgaacctgaagaaagacgacggctatgctgctcttcatctcgcg
gctctcaatggtcatagagatgtggttgagaccctattagtacaggggcacggtgacatg
aacgtgcggaacaaccgtcgtcagacccccctgatcctggcagcgggccaaggccacacc
catgtcatcgagcttctggtgacgaaaggagccgaggtgtcggccgaggacgaggatggc
gatacaagtctacatctagctttggttcggcaagaagtgtatgctgagagagacgattca
cccttcattcaactgtaccgaaccaagatagtcagtggtttggtggtgaacatggcgata
gcgacagtctgtttcttggtcaaggccggaggtagtctaactcataggaaccaccagagc
aagtctccattagacctggtcctggatatcaagatcaagaactacctgttgcagctctat
gatcagagaagacaaaagcagagacatgataaagattccaagcagggtagaagacagagg
agcgcaagtcaagagagactcctggctagcagaggagatacaccaggtacctcccagaat
gtccgaggcccatccaccccggccggaccgtccacaccagccggacctcctgcgccggct
ggaccgtccacaccagccggacctcctgcacccgtggagggtccctcgggggattcccca
gccaaccttgaggcgatcatgtcggactgcaggatgtgcgagaaacccgccaactgtcag
ttcaaaccctgcggccatcaggtggcgtgcatggactgtgcggcactcttccagaagtgc
tactcgtgtaaggcggaggtcaaggacagagtgaaggtcgaggaaaggaaatgtgcaatt
tgtttaacaaacaaggctgaaattacgttggtaccgtgtgggcatcggaatgtgtgcaga
ggatgctgtaacaaagtgaaatcatgcagtacctgtaaacaaccagtgagagaaatgctt
gataaagccggtcaccgtatcacgatctcctccccgtcggcttcatcgtcatcacagcac
catcatcagcgtccttcaagctccaaacaaggagctaagagttcccaagctgcatcaacc
tcgggctcatcaactccacgaggggcgtcgtcgtcgtcagggcgtgtctctaaggaggag
gagcttaaacgtctcaaggagcagtatcaacagatggaggaggaggtcctttgtccgatc
tgcatggagaccaaacgtaacgtggtgttcctctgcggccacagcgtgtgcaagaagtgt
tcaagatcgctcaagcagtgtcctctgtgtcggaagcctatcaccaagaaaatcgtgctt
tttaattag
DBGET
integrated database retrieval system
