Lytechinus pictus (painted urchin): 129276556
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Entry
129276556 CDS
T09066
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03022
Basal transcription factors
lpic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129276556
09124 Replication and repair
03420 Nucleotide excision repair
129276556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129276556
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129276556
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129276556
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129276556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
VWA_3
Zn_ribbon_GTF2H2
Motif
Other DBs
NCBI-GeneID:
129276556
NCBI-ProteinID:
XP_054768912
LinkDB
All DBs
Position
14:complement(16785053..16805742)
Genome browser
AA seq
409 aa
AA seq
DB search
MADDEPEKGYTWEGDYERTWEALQEDEEGSLQATVDDIIQRAKRRRLEDKPSNVRLGMMR
HLFILLDSSRSMEDQDLKPNRLACCSKLLEDFIEEYFDQNPISQVGIITTSNMRAEKLTE
LGGNPQRHITSLEKCSDKPCVKEPSLQNALELAAATLRHMPGHASREVLVIMGSLTTCDP
GNIHDTIQAMKDHSIRCSVIGLAADVRVCRKLATVTHGTYGVILDETHFKELLMEHTIPP
PARANTEPSPIRMGFPQHVLHTDKSKVSAPSMCMCHLDGKNSEGFGTGGYFCPQCQSKYC
ELPVECRVCGLTLVSAPHLARSFHHLFPLDRFEEFKREDHVHPDSLFCHGCQSHIKDQTA
FRCPKCSNIFCLDCELFIQESLHSCPGCASTRPSQSLHHQTNGNRILHS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatgaacctgagaaaggatatacgtgggagggagattatgagagaacttgg
gaagcactccaagaggatgaagaaggatcgcttcaggccactgtggatgacatcatccag
agagccaagaggaggaggctggaagataaacccagtaatgtcaggcttggtatgatgcgt
catcttttcatcctgttggacagctcacgctcaatggaagatcaggatctgaaacctaac
agattagcttgctgttcaaagttgttggaggatttcattgaggaatattttgatcagaac
cctataagtcaggttggaatcatcacaacaagtaatatgagagcagagaaattgacagaa
cttggagggaatccccagagacatatcacctcattggagaagtgtagtgataaaccatgt
gtgaaagaaccttctctacagaatgcattggagctggccgctgcaaccctaagacacatg
cctggtcatgctagcagagaggtacttgttatcatggggagtttgactacatgtgaccct
gggaacattcacgatacgatacaggccatgaaggatcatagcatacgttgttctgtcatt
ggtctagcggctgatgttagagtgtgtcgaaaactagctacagttacacatggtacatat
ggtgtgatccttgatgagactcatttcaaagaacttctaatggaacataccatacctccc
cctgcaagggccaacacagagccatcacctattagaatgggttttccacagcatgtgctt
cacacagacaaaagcaaagtcagtgccccatctatgtgtatgtgccatcttgatggtaaa
aactcggagggctttggaaccggtggatatttctgtccgcaatgtcagagcaagtactgt
gaacttccagtcgaatgtagagtgtgcgggttaacacttgtctcggcccctcaccttgca
cgttccttccatcatctcttcccgctggacaggtttgaagaatttaagagagaagaccat
gttcatccagactccctattctgtcatggctgtcaatctcacatcaaagatcaaacggca
tttcgatgtcccaagtgcagtaatatattttgtctcgactgtgagctgttcatacaagag
tctcttcactcctgtcctggctgcgctagtaccagaccatcgcaatctctacaccatcag
accaatggaaacagaattctgcacagctga
DBGET
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