Lytechinus pictus (painted urchin): 129276879
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Entry
129276879 CDS
T09066
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129276879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129276879
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129276879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
129276879
NCBI-ProteinID:
XP_054769250
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All DBs
Position
14:5594205..5633378
Genome browser
AA seq
683 aa
AA seq
DB search
MTEKAGDEMMVTDVPGFTSVNDFAQKALGKLKVATRTANELPSAGDDYDFYSSYEGFRQF
CNSQGDKLLESIQRLAGQQGAGGSQVGLSRILELEDRVDSLIETNDTLLESAGALLDEAE
GISKPAQTFSPGVSKPQLIVTSWNKKKSEAKDQKSRNFRLMHARNIARPQLKFKDKVDNT
NRPFVPVITSKPNAIKPLQEVFDTVKKSSLRETDSLSPPKRDSETQTEVYPHPYQYELDH
FEPHPSQLEPVDNPSYAPMEATPFTLVDSVKKLKELSQSLQNSKEIAVDLEHHSYRSYLG
FTCLMQISTADQDYVVDTLELRSDLQMLNDAFTDPKIVKVFHGANMDIDWLQRDLGLYIV
NMFDTHQASRSLGFPHHGLASLLSRYCQVEADKQYQLADWRIRPIPEEMLHYAREDTHYL
LYIYHMMKNELIKRGNDQKNLLRAVLDQSKRICVQRYIKPIFTDSSHVIAFNKNRKTFNK
KQMHAFKKLFGWRDSIARQEDESTGYVLPTHMMFQIAEILPKDQGGILACCNPVPPLVKQ
NINEIHHFILEARGFQAKKTGKVKKEVFASQTNTFSAPLIDPLESLLYCPHDHNMHQEGQ
RSTNDLSGSAISALSSSLFGGATPTQPKVSVATPIITIFDTPSSDTRQLDAKRSEAQKKV
QRLKALFANPFEMRTFCQGELPV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaggctggagacgaaatgatggtcacggatgtgccaggattcaccagtgtg
aacgattttgctcagaaagcccttggcaagctaaaggtagccaccagaaccgcaaatgaa
ctgccttctgccggtgatgactacgacttctactccagttatgaaggattcaggcagttc
tgcaattcgcagggagacaaactcctggaaagtatccagaggttagcaggacagcaagga
gccggtggaagtcaagttggtctcagcagaatcctagagcttgaggatcgagtagactct
ctcatcgagaccaatgatacacttcttgaaagtgcgggtgcattgttggatgaagcagaa
ggcatcagcaagccggcccagactttctcacctggcgtatctaaaccacaacttattgtc
accagctggaacaaaaagaaatcagaagccaaggaccagaagtctaggaacttccgtttg
atgcatgcaaggaacattgcaagacctcaactcaagtttaaagacaaggttgataacacc
aacagaccatttgtccctgtcatcacaagcaagcccaatgcaatcaaaccacttcaagaa
gtgtttgatactgtgaagaagtcatctttgagagaaactgattcattgtctcctcccaaa
cgggatagtgaaacccagactgaagtgtacccccatccctaccagtatgagttggatcac
tttgaaccccacccatctcagctggaaccggtagacaacccaagttacgcccccatggag
gccacgcccttcactcttgtagacagtgtcaagaagctaaaggagctgagtcagagtctt
caaaattccaaagagatcgctgttgatttagagcaccattcctaccggtcttatctcggc
ttcacgtgtctgatgcaaatatctacggctgatcaagactacgtagtggacactctagag
ctacggagcgatcttcagatgctgaacgatgcctttactgatccaaagattgtcaaggtc
ttccatggggctaacatggacatagactggttgcagagggatctaggtctgtacatcgtc
aacatgtttgacactcatcaggcatccagatcactaggcttccctcaccatggtctggct
agtctactctcaaggtactgtcaggtcgaggctgataaacagtaccaattagcagactgg
agaataaggcctatcccagaagagatgcttcactatgcacgagaagacacccattacttg
ctgtacatctatcacatgatgaagaatgaactgattaaacgaggcaatgatcagaagaat
ctgctcagggctgtcctcgatcagagcaagagaatatgcgtgcagcgttacatcaagcca
atctttacggactcttcacatgtaatagcattcaacaagaatagaaagaccttcaataaa
aaacagatgcatgcgttcaagaaattgtttggttggagagacagcatagccaggcaggag
gatgagagcacgggatacgttcttccaactcacatgatgttccagatagctgagatacta
ccaaaagaccaaggtggaatcctagcttgttgtaacccagttcctccattggtgaagcag
aacatcaatgagatacatcactttattttagaagctagaggtttccaggccaagaagaca
ggaaaggtgaaaaaggaggtgtttgcttcccaaaccaataccttctccgcccctctgatc
gaccccctggagagcctgctctactgccctcatgaccataacatgcaccaagaaggtcaa
aggtcaaccaatgacctctccggatcagctataagtgccttatcatccagtctttttggc
ggcgccacgcccacccagccaaaggtatcggtagccacgcccatcatcacaatctttgac
acgccctccagtgacactcggcagctggatgccaagaggagcgaagcacagaagaaggtg
cagcggttaaaggccttgtttgccaatccatttgaaatgcgaactttttgtcagggggaa
cttcctgtttaa
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