Lytechinus pictus (painted urchin): 129277698
Help
Entry
129277698 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129277698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129277698
03009 Ribosome biogenesis [BR:
lpic03009
]
129277698
03036 Chromosome and associated proteins [BR:
lpic03036
]
129277698
Enzymes [BR:
lpic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
129277698
Messenger RNA biogenesis [BR:
lpic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
129277698
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
RNase
129277698
Prokaryotic type
rRNA processing factors
129277698
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
129277698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helical_CED_Drosha
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
129277698
NCBI-ProteinID:
XP_054769821
LinkDB
All DBs
Position
15:complement(9587383..9623511)
Genome browser
AA seq
1646 aa
AA seq
DB search
MHSQHPPPGPGPERPPFNPRLSGPYPRPPPPRGPGTGPIRFGQNHAPLGPPPGSQGPFGP
QGQYPAHPPEVHPNGHGDWPPPVGQNMAFPNRPPPPLPPFMGPPPPFSRPPPPLPFPNGP
PPRPDMRIPPPGFDFRMRPPPPFNPQRPPAPHLPPPPPDFSNHPDKQGMQMSGFDHQGCG
HKPNEQCVPGGKHQDHNFRPPGNVSSPGDRFSKQHGQTSQDSSYNPRRESQRPQNSSKQE
GPKNKDLDGQGSRLSRQSVQQDPTSQRDGGYRGSSKDSIDGDRQRSAGDHYRDRERSRDR
SARDSRDLDSRDYSRRQRDRSRERSSRRERSRSPRQGRHGDRGRTREKSPSRDRSSRREL
QSEDSRSNERSRSPRRYDRSSRETSSQRNSSPHSRTSADSHDQKDRRSRSPSRDQRSKDR
EGSLHRYSSRKTDGPATDPSKPCQRWNDLERELREEERQEKEKEVERDPFEDSDPEDWGA
DDTPWIQCSPRENFYSINPNDQINASSIAGTEKMKELLKRFEAELVERGPRVRASQPEPE
QKKPELHWHYHSHDDHEDSDTSDSDSDASSGEEDENYDFRIACLENRANHPWRLAENLWF
NDPGEMYDGPLCKCSIKQKKSGIRHNIFPGEKPIPRCEPHTNNASRLHHYRVTISPTTNF
LTTTQTVIIYDKREYIFEGFSLFSHHSLEEVPECKVVRFGREYTLHFFPEPMPEHFTVKG
LDLFSRFLFEEILELWDFDFKGKEGGCHHFHFMPRFARLLPNNGKEILSMHHVIQYLIRS
SRPIIDPAKLDDWLAVSETSWQRYVDKLQHMIATRPGKKPSSIRIDQLDRDQMDPEKKTF
PVIVHFGVRPAQLSYIGDPNYRKLLKSFTRLRHLLLNKPRVTXADKEKMAEKEAKLQKIR
IQGSRVREVTAEVSSEQMLATGIGVDICQHALMLPVLVNHLRYFGCLNNLYKVLGYKFQD
PMLLRYAMTHPSYKLYFGTTPDHVRNSLYNCGIRCRQDHTEHKKVLAKERKKGINQLYRI
MSLMASNDELPSHIKHYERLEFLGDAVIEFLSSTHLYHLFPDLEEGGLATYRMALVQNQH
LSVLAKKLELDKYMLYAHGPDLCRPYDLRHAMANCLEAVFGAIYLEAGLDLCREIFGKLL
FEEEQFQNIWLKHPKDPLQADFPDTDRHLIKNSEVLQKLTVFEEDTGMQFRHIRLLARAF
TQRSVGYTNLTQGSNQRLEFLGDSVLQLVVSSYLYKHFPYHHEGHLSLLRSSLVNNKTQS
IIAQELGLVEYIIEPKIRPRNENNVPMKILADLVEALIGAMYVDHGLDVVETFCGVVFYP
RLKDFIQKNHWNDAKSQLQQCCLTLRVEGQEPDVPYYKVISQSGPTNSRQYSVAVYFKAK
RMSTGTASNIRDAEMEAAKNALRKGNFPHLYFQRKCAMLRKQREAMMDDERMKEEEERRN
GEGKGDSGARRGRSDDSRGRRDEGRAEFSRSEGRRDERRREDGRREDRDERRRDDGRRDD
GRRDERRKEEGRRDEREESRDDRRRDDGRRDERRREERRDDRRKEEGRKDEGRGERRRDE
NQMVERRDRRDERKNDRRNDDGRDTRRDDVRREERKRDDGRRRDDRSDGESRPAEKKDDA
PSSTDVNSREEKNRNIHGKNEAVTER
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccagcatcccccacctggtccaggacccgagaggcctcctttcaaccctcgg
ctttctggaccttacccaaggcctccccctccaagaggaccaggaacaggccctattcgc
tttggtcagaaccatgcacccttaggaccacctccaggctcacagggaccatttggacct
caaggacagtaccctgctcatccaccagaggtgcatccaaatgggcatggagactggcct
cctccggttggacaaaacatggcttttccgaataggcctccacctccgctaccacccttt
atggggccaccgccacccttttcaaggccaccgccccctttgcccttccccaacggccct
cctcccaggcctgacatgcggattccacccccggggtttgattttagaatgagacctcca
ccccctttcaaccctcagagacctcctgcaccccacttgccaccacctcctcctgacttc
tctaatcatcctgataaacaagggatgcagatgtcaggattcgatcaccaaggatgtggg
cacaaacctaatgaacagtgcgttcctggaggaaagcatcaagaccacaactttcggcca
cctggtaatgtctcctcacctggagacagattttcaaagcagcatggccaaaccagccaa
gattcttcctacaaccctcgtcgggaatcccagaggccacagaactcttctaagcaggag
gggccaaaaaacaaagatcttgatggacaagggtcacgcttgagcaggcaatctgttcaa
caagatccaacctcacaaagggacggagggtatcgtggttcaagcaaagactctattgac
ggtgacagacaacggtcagcgggtgaccattatagagacagagaaaggtcaagagatcgc
tcggccagagacagcagagatttagattccagggattactctcgtcggcaaagggacagg
tccagagagcgatcatcgaggagggagaggtcacgatctcccagacaaggtcgtcatgga
gacagaggcaggacaagggagaagagtccatcaagggacaggagctcaaggagagagctc
caaagtgaagactcaagaagcaatgagagatccagatcacctagaagatatgaccggtct
tcaagggaaacgagttcacagaggaatagcagtcctcattctaggaccagtgctgatagt
catgaccagaaagataggagatcccgaagcccttctagggatcaaaggtccaaggataga
gagggttccctgcatagatacagcagtaggaaaacagatgggcctgccacagatcctagc
aaaccctgccagcgctggaacgatctggagagagagctgcgagaagaagaacgtcaggag
aaagagaaggaggtagagagggacccctttgaggattctgacccggaggattggggtgcg
gacgataccccttggatccagtgctccccaagagaaaacttctactccattaaccctaat
gatcaaattaatgcaagttctatagctggtacggagaaaatgaaagaacttctgaagcgg
tttgaggcagaactcgtagaacggggacctcgtgtgagagcgagtcagcctgagccagag
cagaagaagcccgaactccattggcattaccattctcatgacgaccatgaggatagcgat
actagcgatagtgactcagacgcctcgtcgggcgaggaggatgagaattatgatttccgc
attgcatgtcttgagaacagggccaaccacccgtggcgtctggctgagaatctgtggttt
aatgaccccggagagatgtacgatggtcccctgtgcaagtgtagcatcaagcagaagaag
agcggtatcaggcataacatctttcctggagagaaacccatcccacggtgtgagccacac
accaacaatgcctccaggctgcaccattacagggtcacgatctcacctactaccaacttc
ctgacaactacccagactgtcatcatctacgacaaacgagagtacatctttgaaggattc
tctctcttttcacatcattccttggaagaagtcccagaatgcaaggtggtccgatttggc
cgggagtacacccttcacttcttcccagagcctatgcctgagcattttacagtgaaaggc
ttggatttattttcgaggttcttgtttgaagaaattcttgaactttgggactttgatttc
aaaggaaaagaaggtggatgtcatcacttccatttcatgccccgctttgcccgtctcctt
cctaacaatggcaaagagatcctgtccatgcaccacgtgatccaatacctgatccgaagc
agcagaccgatcatagatccggccaagctggacgactggctggccgtcagcgagacctcg
tggcagagatacgtggataagctccagcatatgattgccacgcgcccagggaagaaacca
tcgtcaatacggattgatcagcttgaccgagaccagatggacccggagaagaagaccttt
cccgtcattgtccactttggtgtccggcccgcccagctttcctacattggagacccaaac
tatcgtaagctgctgaagtcgttcacccgactgcgtcatctgctgctgaacaagccgagg
gtgaccngggcggacaaggagaagatggcggagaaagaggctaaactgcagaaaatccgt
atccagggaagcagagtccgagaggtcacggcagaggtcagcagtgagcagatgctagcc
actggtataggagtggacatctgtcagcatgctctgatgctcccagtgctcgtcaatcac
ctacgatactttggttgcctcaacaacctctacaaggtcttgggttacaagttccaggac
cccatgctactaaggtatgctatgacacatccgtcttacaaactgtactttggaaccacc
cctgaccatgtgaggaactctctgtacaactgtggcatccgctgcagacaggatcacaca
gaacacaagaaggtcctcgcaaaagaaagaaagaaaggaatcaatcagctgtaccgcatc
atgtctctgatggcttcaaacgacgagctgccgtcccacatcaagcactacgagcgtctg
gagttcctcggggatgcggtgatcgagttcctctccagtactcacctctatcacctgttc
cccgacctggaggagggtgggttggcgacgtatcgtatggcactggtccagaaccaacat
ctgtcggtcttggcaaagaaacttgaacttgataagtacatgctctatgcccatgggcct
gacctctgtcgaccctatgaccttcgacatgcgatggcgaattgcttggaggcggtcttt
ggtgcaatatacctggaggcagggctggacctatgtcgggagatctttggcaaattgctg
ttcgaggaagaacaatttcaaaatatctggttaaaacatcccaaagaccccttgcaggct
gatttccccgacacagaccgacatctgatcaagaattcagaagtgttacagaaattgaca
gtatttgaagaagacactgggatgcagttccggcacattcggcttcttgccagagctttt
acccagagatctgtgggatataccaatctgacacagggctccaatcaaaggcttgagttc
cttggtgattctgtgctgcagcttgttgtgtcctcctacctctacaaacacttcccatat
catcacgaaggacacttatcactcttgaggagctctctggtcaacaacaagacccagtct
atcatagcccaggaacttggtctcgttgagtacatcatagagcccaagatcagacccagg
aacgagaacaatgttcctatgaagattctggctgatcttgttgaagctttgattggtgcc
atgtacgtagaccatggactcgatgttgtggaaacgttctgcggtgtagtattttatcct
cggctaaaggatttcatccagaaaaaccactggaacgatgccaagtcccaactccagcag
tgctgcttgaccttacgggtcgaaggtcaggaaccagatgtaccctactacaaggtcatc
agccagagcgggcccacaaactcccgtcagtactcggtagccgtctacttcaaggcaaag
cgaatgtcgacagggacagcgtctaatatcagggacgccgagatggaagctgccaagaat
gccctgaggaaggggaacttcccgcatctttatttccagcggaagtgcgcgatgttgcgg
aagcagagggaggccatgatggatgatgaaaggatgaaggaagaggaggagaggagaaat
ggggaggggaaaggggatagcggagcgaggagaggaagaagtgatgattcaagaggaagg
agggatgagggaagggcggaattttctaggagtgagggaaggagggatgaaaggagaagg
gaggatgggagaagggaagatagggatgagaggaggagagatgatggtaggagagatgat
ggaaggagggatgaaagacggaaagaggagggaaggagagatgagagggaagagagtaga
gatgacaggagaagggatgatggcaggagagatgaaaggaggagggaagaaaggagagat
gatcgaaggaaagaggaaggacggaaagacgaaggaagaggggagaggaggagagatgaa
aatcagatggtggaaagaagggatagaagagatgaaagaaaaaatgacaggaggaatgat
gacgggagagatacaaggagagatgatgtaagaagagaagaaagaaagagagatgatgga
agaagaagggatgataggagtgatggagaaagtagaccagcagagaagaaagatgatgct
ccctcatcaacagatgtcaatagtagagaagagaagaatagaaatattcatggaaagaat
gaggcagtgacggagagatga
DBGET
integrated database retrieval system
