Lytechinus pictus (painted urchin): 129277869
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Entry
129277869 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129277869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129277869
Spliceosome [BR:
lpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129277869
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
PRP4
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
eIF2A
Motif
Other DBs
NCBI-GeneID:
129277869
NCBI-ProteinID:
XP_054770028
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Position
15:26645699..26660745
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AA seq
502 aa
AA seq
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MSEEDGGPALKKPRVHYGSLEEHLKKPDASDAINMGLEAGNINLSGGETFDMEEHISERR
KELLAEFERRRKARQITVSTDDSEVKAQLRKYGEPICIFGEGPAERRERLRHLLAALGEM
ADQDKQAKKASKEKAKADQAEKQTTWYHEGPASLKNARLWIAEYSLPRADKRLQEAAETM
RIPESQSNARRQELHRKARSLTAIGSQVGDQRPISYCRFSPDSRLLATASWSGLIKLWTS
PDFNLFKTLRGHNAHVGCVVFHPQATLSLSPNACCMASCSADGAVKLWNFESDEPIANIE
GHEARVSKIEYHPSGRFLGTACFDSLLRLWDLEVQEEILHQEGHSKAVYSIDFQKDGAVC
ATGGMDAFGRLWDLRTGRCIMFLEGHLKSVLAVNFSPNCYQLATGSEDNTAKIWDMRQRK
VLYTIAAHQNIITGLKFQRNYRDYLITCSYDGTAKVWAHPGWSPLNTLAGHDGKVMSVDL
SPNEKYIATSSLDRTFKLWAPE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggatggaggacctgccttgaagaaaccaagggtccactatggttccctg
gaggagcatctcaagaaacctgatgcctctgatgctatcaacatgggtcttgaggcgggc
aatattaacctctccggtggtgaaacatttgatatggaagaacacatcagtgaaagaaga
aaagaattattggcagaatttgaaagaaggagaaaggcaagacaaatcacagtctcaaca
gatgattctgaagtaaaggcacagctgaggaaatatggagaacctatttgtatatttggg
gaaggcccggcggagagacgagagaggcttcgtcatctccttgctgctctcggggagatg
gccgaccaagacaaacaagccaagaaagccagcaaagagaaggccaaagctgatcaagcg
gaaaagcaaactacatggtatcatgagggtcctgcgagtctgaaaaatgccagactgtgg
attgctgagtattctttaccaagagctgataagaggttacaggaagcagcagaaaccatg
aggattccagaatctcagtcaaatgcaaggagacaagaattacacagaaaagcaagaagt
ctaacagcaataggtagtcaggttggagaccaaaggcccatctcttattgtcggttcagc
cctgactcaagattacttgccacagcttcatggagtggtcttatcaagctgtggacttca
ccagacttcaatctgttcaagacactgagaggccacaatgcccatgtgggctgtgtggtg
ttccaccctcaagctaccctctcgctctcccccaacgcctgctgcatggcttcttgctcg
gcagacggtgcggtcaaactctggaactttgaaagtgatgaacctattgcaaacatagaa
ggtcatgaagcaagggtgagcaaaatagagtaccacccatcaggaagattccttggtact
gcttgctttgactccctcctgagactatgggatcttgaggtacaggaggagattctccac
caggagggccacagtaaagcagtctactccatcgactttcagaaggatggtgctgtatgt
gcaacaggtggtatggatgcctttggtaggttatgggacctgaggacaggacgatgtatc
atgttcttggagggtcatctcaagtcagtactagcggtcaacttctcaccaaactgctat
cagcttgctactggtagtgaggataacacagctaagatttgggacatgagacagaggaaa
gtactttataccattgcagctcatcaaaatatcataacaggactcaaattccaaaggaac
tacagggattatctcatcacctgttcatatgatggcacagcaaaggtttgggcacatcca
ggatggtcgcctctcaacactctggcagggcatgatgggaaggtcatgtccgttgacctg
tcacctaatgagaaatacattgccacatcgtcacttgacaggacattcaagttgtgggct
cccgagtga
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