Lytechinus pictus (painted urchin): 129277899
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Entry
129277899 CDS
T09066
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129277899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129277899
Enzymes [BR:
lpic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129277899
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129277899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
129277899
NCBI-ProteinID:
XP_054770057
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All DBs
Position
15:complement(28150583..28165619)
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AA seq
391 aa
AA seq
DB search
MSKQWRMIPCHISELRLDITLACGQSFRWKEIEPGIWRSVLGGSIWTLKQTGTHIFYQRH
NHSTCQEEENCDQTGDALQSQRKKRGAGQNHAFKSKKRAKVTSGSGEDGRGNSAKGEEDD
GKSSRDILRDYFQLDVNLGELYNQWQKADKNFSKVSQGFPGVRILRQDPVENLISFICSS
NNNIARITGMVGKLCQEFGDEVGVLDGVSWHSFPSLAALSGKGVEEALRKMGFGYRAKFI
SHSAQMMTKDLGGEDWLRGLRGQPYLEAHSELMKLPGVGAKVADCVCLMSLDKRGAIPVD
THVWQIASRDYIHTLQKTKTLTDRTYRQIGDFFRELFGEYAGWAHSVLFSADLKKFQESP
SPKPKNGKTQKEQHGKVQKSKRRSPNGQSVR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacagtggcgaatgatcccgtgtcacatatcagaattgcgtttggacattacc
cttgcatgtgggcaaagttttagatggaaggagattgaaccaggaatatggaggagtgtg
ctaggaggcagcatctggactctgaagcagaccggtacccacatcttctaccaacgtcac
aatcatagcacatgtcaagaagaagagaactgtgatcagactggtgatgcactgcagtcc
caacggaagaagcgaggagctggtcagaatcacgccttcaagagtaagaaaagggcaaag
gttacatcgggcagcggagaagatgggcgtggtaatagtgccaaaggggaagaagacgat
ggaaaatcctcaagggacattttacgagactatttccagctcgacgtgaacctgggagag
ctgtacaaccagtggcagaaagcagacaagaacttctccaaggtgtcccaggggtttcct
ggagttcgtatcctgagacaagatcccgtagagaacctgatctccttcatctgttcatct
aataataacattgcaaggatcactgggatggttggaaagttgtgccaggaatttggagat
gaggtgggagtattagatggtgtatcctggcattcttttccgtccctggcggctttgagc
ggcaagggtgtggaggaagcgctgcggaagatggggtttggatacagggcaaagttcatc
agccattcagctcagatgatgaccaaagaccttggaggcgaagactggttgaggggtcta
cgaggtcagccctatctggaggcccattctgaattgatgaaacttcccggtgtaggggca
aaggttgcagactgtgtatgtttgatgtccttagacaagagaggagccataccagtagac
acccatgtctggcagatagcatccagggattacatacatacactgcagaagacaaagacc
ctgacagatcgcacttaccgccagattggcgacttcttcagagaactcttcggggaatat
gcaggctgggctcattcggtcctattcagtgctgatctaaagaaatttcaagaatcaccc
agccctaaaccaaagaatggaaagactcaaaaggaacagcatggaaaggtccaaaagtca
aagagaaggtcacccaacggacaatcagtcagatga
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