Lytechinus pictus (painted urchin): 129278243
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Entry
129278243 CDS
T09066
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129278243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129278243
03009 Ribosome biogenesis [BR:
lpic03009
]
129278243
03036 Chromosome and associated proteins [BR:
lpic03036
]
129278243
Enzymes [BR:
lpic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
129278243
Messenger RNA biogenesis [BR:
lpic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
129278243
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
RNase
129278243
Prokaryotic type
rRNA processing factors
129278243
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
129278243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
Helical_CED_Drosha
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
129278243
NCBI-ProteinID:
XP_054770426
LinkDB
All DBs
Position
15:complement(9483527..9505464)
Genome browser
AA seq
1109 aa
AA seq
DB search
MYFPNLQMYDGPLCKCSIKQKKSGIRHNIFPGEKPIPRCEPHTNNASRLHHYRVTISPTT
NFLTTTQTVIMYDKREYIFEGFSLFSHHSLEEVPECKVVRFGREYTLHFFPEPMPEHFTV
KGLDLFSRFLFEEILELWDFDFKGKEGGCHHFHFMPRFARLLPNNGKEILSMHHVIQYLI
RSSRPIIDPAKLDDWLAVSETSWQRYVDKLQHMIATRPGKKPSSIRIDQLDRDQMDPEKK
TFPVIVHFGVRPAQLSYIGDPNYRKLLKSFTRLRHLLLNKPRVTEADKEKMAEKEAKLQK
IRIQGSRVREVTAEVSSEQMLATGIGVDICQHALMLPVLVNHLRYFGCLNNLYKVLGYKF
QDPMLLRYAMTHPSYKLYFGTTPDHVRNSLYNCGIRCRQDHTEHKKVLAKERKKGINQLY
RIMSLMASNDELPSHIKHYERLEFLGDAVIEFLSSTHLYHLFPDLEEGGLATYRMALVQN
QHLSVLAKKLELDKYMLYAHGPDLCRPYDLRHAMANCLEAVFGAIYLEAGLDLCREIFGK
LLFEEEQFQNIWLKHPKDPLQADFPDTDRHLIKNSEVLQKLTVFEEDTGMRFRHIRLLAR
AFTQRSVGYTNLTQGSNQRLEFLGDSVLQLVVSSYLYKHFPYHHEGHLSLLRSSLVNNKT
QSIIAQELGLVEYIIEPKIRPRNENNVPMKILADLVEALIGAMYVDHGLDVVETFCGVVF
YPRLKDFIQKNHWNDAKSQLQQCCLTLRVEGQEPDVPYYKVISQSGPTNSRQYSVAVYFK
AKRMSTGTASNIRDAEMEAAKNALRKGNFPHLYFQRKCAMLRKQREAMMDDERMKEEEER
RNGEGKADSGARRGRSDDSRGRRDEGRVDFSRSEGRRDERRREDRDERRRDDGRRDGGRR
DEGRRDDGRRDEGRRDEGRRDGGRRDDGRRDEGRRNEGRKVDGQKDEGRRDEGKREEGRR
DGRRDERRKEEGRRDEREESRDDRRRDDGRRDERRREERRDDRRKEEGRKDEGRGERRRD
ENQMVERRDRRDERKNDRRNDDGRDTRRDDVHVRREERKRDDGRRRDDRSDGESRPAEKK
DDAPSSTDVNSREEKNRNIHGKNEAVTER
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcccgaacctacagatgtacgatggtcccctgtgcaagtgtagcatcaagcag
aagaagagcggtatcaggcataacatctttcctggagagaaacccatcccacggtgtgag
ccgcacaccaacaatgcctccaggctgcaccattacagggtcacgatctcacctactacc
aacttcctgacaactacccagactgtcatcatgtacgacaaacgagagtacatctttgaa
ggattctctctcttttcacatcattccttggaagaagtcccagaatgcaaggtggtccga
ttcggccgggagtacacccttcacttcttcccagagcccatgcctgagcattttacagtg
aaaggcttggatttgttttcaaggttcttgtttgaagaaattcttgaactttgggacttt
gatttcaaaggaaaagaaggtggatgtcatcacttccatttcatgccccgctttgcccgt
ctccttcctaacaacggcaaagagatcctctctatgcaccatgtgatccaatacctgatc
cgaagcagcagaccaatcatagatccggccaagctggacgactggctggccgtcagtgag
acctcgtggcagagatacgttgataagcttcagcatatgattgccacgcgcccagggaag
aaaccatcgtcaatacggattgatcagcttgaccgagaccagatggacccggagaagaag
acctttcccgtcattgtccactttggtgtccggcccgcccagctttcctacattggagac
ccaaactatcgtaagctgctgaagtcgttcacccgactgcgtcatctgctgctgaacaag
ccgagggtgaccgaagcggacaaggagaagatggcggagaaagaggctaaactgcagaaa
atccgtatccagggaagcagagtccgagaggtcacggcagaggtcagcagtgagcagatg
ctagccactggtataggagtggacatctgtcagcatgctctgatgctcccagtgctcgtc
aatcacctacgatacttcggttgcctcaacaacctctataaggttctgggctacaagttc
caggaccccatgctactaaggtatgctatgacacatccgtcttacaagctgtactttgga
accacccctgaccatgtgaggaactctttgtacaactgtggtatccgctgcagacaggat
cacacagaacacaagaaggtcctcgcaaaagaaagaaagaaaggaatcaatcagctgtac
cgcatcatgtcgctgatggcttcaaacgacgagctgccgtcccacatcaagcactacgag
cgtctggagttcctcggggatgcggtgatcgagttcctctccagtactcacctctatcac
ctgttcccagacctggaagagggtgggttggcgacgtatcgtatggcactggtccagaac
caacatctctcggtcttggcaaagaaacttgaacttgataagtacatgctctatgcccat
gggcctgacctctgtcgaccctatgaccttcgacatgcaatggcgaattgcttggaggcg
gtctttggcgcaatatacctggaggcagggctggacctatgtcgggagatctttggcaaa
ttgctgttcgaggaagaacaatttcaaaatatctggttaaaacatcccaaagaccccttg
caggctgatttccccgacacagaccgacatctgatcaagaattcagaagtgttacagaaa
ttgaccgtatttgaggaggacactgggatgcggttccggcacattcggcttcttgccaga
gcttttacccagagatctgtgggatataccaatctgacacagggctccaatcaaaggctt
gagttccttggtgattctgtgctgcagcttgttgtgtcctcctacctctacaaacacttc
ccgtatcatcacgaaggacacttatcactcttgaggagttctctggtcaacaacaagacc
cagtctatcatagcccaggaacttggtctcgttgagtacatcatagagcccaagatcaga
cccaggaatgagaacaatgttcctatgaagatcctagctgatcttgttgaagctttgatt
ggtgccatgtacgtagaccatggactcgatgttgtggaaacgttctgcggtgtagtattt
tatcctcggctaaaggatttcatccagaaaaaccactggaacgatgccaagtcccaactc
cagcagtgctgcttgaccttacgggtcgaaggtcaggaaccagatgtaccctactacaag
gtcatcagccagagcgggcccacaaactcccgtcagtactcggtagccgtctacttcaag
gcaaagcgaatgtcgacagggacagcgtctaatatcagggacgccgagatggaagctgcc
aagaatgccctgaggaaggggaactttccgcatctttatttccagcggaagtgcgcgatg
ttgcggaagcagagggaggccatgatggatgatgaaaggatgaaggaagaggaggagagg
agaaatggggaggggaaagcggatagcggagcgaggagaggaagaagtgatgattcaaga
ggaaggagggatgagggaagggtggacttttctaggagtgagggaaggagggatgaaagg
agaagggaagatagggatgagaggaggagagatgatggtaggagagatggtggtaggaga
gatgaggggaggagagatgatggtaggagagatgaggggaggagagatgaggggaggaga
gatggtggtaggagagatgatggaaggagagatgagggaagaagaaatgaaggaagaaaa
gttgatggacagaaagatgagggaagaagagatgagggcaagagagaggagggaaggaga
gatggaaggagggatgaaagacggaaagaggagggaaggagagacgagagggaagagagt
agagatgacaggagaagggatgatggcaggagagatgaaaggaggagggaagaaaggaga
gatgatcgaaggaaagaggaaggacggaaagacgaaggaagaggggagaggaggagagat
gaaaatcagatggtggaaagaagggatagaagagatgaaagaaaaaatgacaggaggaat
gatgacgggagagatacaaggagagatgatgtacatgtaagaagagaagaaagaaagaga
gatgatggaagaagaagggatgataggagtgatggagaaagtagaccagcagagaagaaa
gatgatgctccctcatcaacagatgtcaatagtagagaagagaagaatagaaatattcat
ggaaagaatgaggcagtgacggagagatga
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integrated database retrieval system
