Lytechinus pictus (painted urchin): 129278519
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Entry
129278519 CDS
T09066
Name
(RefSeq) transcription factor Sox-3-B-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpic03000
]
129278519
Transcription factors [BR:
lpic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129278519
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129278519
NCBI-ProteinID:
XP_054770646
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All DBs
Position
16:complement(11601139..11604169)
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AA seq
351 aa
AA seq
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MSAPGVHEQTELKHSVNVMASSIPGMAHHVGALTQASVMGNGGPPGVGSNKNNNNPNNNP
DRVKRPMNAFMVWSRGQRRKLSQENPKMHNSEISKRLGAEWKLLSEDEKRPFIDEAKRLR
AVHMKEHPDYKYRPRRKTKTLLKKDKFSLPGIINPQTGAPVQRGVGEGMHGYQHLNGYMN
GYPGMMQDQLSHLPSHSYGAHQAAQMANSGLHHRYDMTQLGYPPTCMSTTHAASYLSPVA
ANYSAAYSQAAMMHHAPPGASVAKSEQGNMPTERTQSAATAVSSGRPMPGDSSLRDMINM
YLPGDANDPNVQRQHAMQQAAAAAYHGTHGTSVTSTSGGVGVNGTVPLTHM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccgggtgtgcacgaacaaactgagctgaagcactccgttaacgttatggcg
agttctatcccaggcatggcccaccacgtcggggccctgacacaagcatcggtcatgggc
aacggcggaccgccgggcgtgggaagcaacaagaacaacaacaatcccaacaacaaccca
gacagagtaaagagacccatgaacgcttttatggtgtggtcaagagggcaacgcaggaag
ctgtcgcaggaaaaccccaaaatgcacaattctgagatcagcaaaaggttaggagccgag
tggaagttgctgtccgaggacgaaaagaggccgttcatcgacgaggcaaaacgactccga
gcggtgcatatgaaggagcaccccgactacaaatacaggccacgtcgtaagacgaagacc
ctgttgaagaaggacaagttttccttacctggtatcatcaacccacagactggggcacct
gtacagagaggagtaggagaaggtatgcacggctaccagcatctcaatggctacatgaac
gggtatccaggcatgatgcaagaccagctatcgcacctcccatcgcattcctacggggca
catcaagctgcacaaatggccaacagtggacttcatcacaggtatgacatgacccaactt
gggtacccccctacgtgtatgtccaccacacacgccgcttcatacctcagccccgtcgct
gccaactactcggccgcctacagccaagcagctatgatgcatcatgcaccgcctggcgcc
tccgtcgccaaatcggaacaagggaacatgcccacagagcgaacgcagtcagcagccacc
gccgtctcctccggccgaccgatgcccggtgattcgtcgcttcgcgatatgatcaacatg
tacctccccggcgacgccaacgaccctaacgttcaacgtcaacatgctatgcaacaggct
gccgccgccgcgtatcatggcacccatggcaccagtgtcacatctacaagcggcggtgtt
ggtgtaaacggtaccgttccactcacgcatatgtaa
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