Lytechinus pictus (painted urchin): 129278897
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Entry
129278897 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129278897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129278897
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129278897
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
HECT type E3
129278897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
Sugar_tr
WWE
MFS_1
Motif
Other DBs
NCBI-GeneID:
129278897
NCBI-ProteinID:
XP_054771000
LinkDB
All DBs
Position
16:27102735..27152541
Genome browser
AA seq
2234 aa
AA seq
DB search
MEFGYNIGVITGPSPFIQQFFNDTLFERSGEEPSENSLTWLWAATVSIYCVGGSLGALAG
GYWADKFGRNRGLLYNNFISILAAILMGCCYSANSPEMLIIGRFVIGFSVDASNADGSSG
AHLIKNNKHKHEVCIPVTTLKSKRHNLLKKSKKTVELSKHNLLQSEDSNQNSVSGNESAN
SRDSKQRRRGSTSSASSAWSSLSGGSSHFSLSDSTGSVCFAGSSLASAALPTGEPEDSGP
SSSNNSKRGRVNINITSRSLRSYSRNHPYQFEALDYYAPRRLGLRTTTTLSTSFTKSEEP
KVNSVTFGGAQAKANDLTTTSASKDKSLTPSDQAGPKKAKGTVSKTPINKAPVQAAQAKR
KSNKKLAKSASTKQSSSGSASPPKRRQSSNHKATIKGKGKGRSSTARSDSLRQRSTETTT
GTCASTRSRRSSGMSKRGPGGSGRQEGRTGGRDANTDANPTNAPTASDESAQGATAAGSS
TGASALAAGSKGDADESEVTRLQALLESRGVPPHLFNALGPRMHQLLQRSMGSGASTKAH
QLLSGLQAMGDESQQLQAVIEMCQLLVMGNEDTLGGFPVKQVVPALISLLSMEHNFDIMN
HACRALTYMMEALPRSSSVVMDAIPVFLEKLQVIQCMDVAEQSLTALEMLSRRHSKAILQ
AGGLCACLLYIEFFSITAQRNALAVAANCCQSMGPDEFHLVANSLPLLSGRLQHQDKKSV
ESCCLCFARLVDNYQNDEKLLLHIAEHGLLTNLQQLLVVTPPIISTGTFIMVIRMLSLMC
ANCPSLAVQLLKQNIAETISYLLIGASDSSNLDIELVSRSPQELYEITSLISELMPRLPR
DGLFSVDAYLKKVPNLITEAALWQWRDDRGMWHPYTRIDNRIVEAAHQAGEDEVTLSTLG
RTYTIDFNAMQQINEDTGTARPVQRRPNPAAGTGSSSASSVTAPKEDARVVFMKEDGEQS
AAFIKSLFAVLYEVYSSSAGPAVRHKCLKALLRMVFFGKPDLLKDMLKNHAVSSHIAAML
SSQDLKVVVGALQMSEILMQKLPDIFHIYFRREGVMHQVKNLAEATITADSSPPVKDKFS
ASKVTASDPSSSSSSSTPASSASSASSASSSASSTHTPSPRDTININVGLDSDGVPQGRL
SDALKLKRATKRGPGRKSNRYASNDDTPSQGGHGHHYDAIDTPPGRLSAVSVPMPPSSRA
VGGSSGGRTGVSKGKGSTGKMVSGSTSSRSSFLASLNLSRWGRGASNSPSSTNTTQSNTA
MGSDHHHHHHHHHHLHTAAGREMGLQRGGAGMGYGSDRILGHGSENLLGVQKDASGSQKE
KVRAWIKEQASQFISQYFSQTDHQGESHPALTLLNQLCTNADKLTLKDDEGSEMLESIAH
ILTNSDISAFEILHSGLVVKLLEYMTNKSDHNPVSRDLRLQRFLHIFLQCPAPGSPPFTS
LEIPENPPFTSLVSKINGCINHLEQFPVKVHDLPGAGGSSGGTRGSQALKFFNTHQLKCQ
LQRHPDCANLRQWRGGPVKIDPLALVQAIERYLMVRNYGRMRQDDEDSDDDASDDEIDES
VATAFSSSNTNIKHKLQFLIGEQVLPYNMTVYQAIKQFGSAASASEEDRDTDDESNPLGR
AGIWIKTHTIWYRPVPEAGSISTQKSSSNSSTTTTTTTTRKGKGGSSSKSSSKGRKHDEL
WMDGVCPVIQKELDKYLHCNLPGSVPIEDPSCAAITLLRVLYGLSRHWNNLYPGALPQQA
LGSSEFVNSKLSAKANRQLQDPLVIMTGNLPSWLNAVAQACPFLLPFDTRQLLFYTTAFD
RDRAMQRLQDNNPDMSTSENSERVAPRLDRRKRSVSRADLLRQAESVMEDLANSRAVLEI
QYEDEVGTGLGPTLEFYALVSREVQRADLDLWRGDSVLLPDPKGKQAGVKYIHSPHGLFP
SPIGRNAKASAVAKIKSKFTFMGRFIAKALMDSRMIDIPLSLPFYKWLLGQEATLTSADL
QYIDRTLARSFQQLEELGQQKQRLVDDPSQTAASLQLALESLSIDGSPVEELGLDFTLPG
YPNIELKKGGKDIDVTIHNLDEYLKLVVRWTLNEGVSRQFEALKDGFQSVFPLSHLQSFY
GEELDQLFCGNRSEPWDIKTLIECCRPDHGYTHDSRAVKLLFELMASYTDGQQREFLQFV
TGSPKLPVGGFRSLNPPLTIVRKMFEGSEDPDKFLPSVMTCVNYLKLPDYSSREVMASKL
SVAIREGQQSFHLS
NT seq
6705 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgggtacaacatcggtgtcataaccggaccgtctccattcatccagcaattc
ttcaatgatacactcttcgaacggtctggtgaggagccgagtgagaacagtctcacctgg
ctttgggctgccactgtttctatctactgcgtcggagggagcttgggggctctcgctggc
ggctactgggctgataaattcggcagaaatcgtgggctcttgtacaataattttatctct
atcttggcggccattttgatgggatgctgttactcggccaattcaccggagatgctcatc
atcggccgtttcgtcatcggattcagcgtcgatgcatcaaatgctgacggtagcagtggt
gcccatcttatcaagaacaataaacacaaacacgaggtgtgcattccagtcaccaccctc
aaaagcaaacgtcacaacctcttgaagaaatccaaaaagactgttgagctttcgaagcac
aacctgttgcagagcgaggactctaatcagaacagcgtcagtggcaacgagagcgcaaac
tcgcgggactcgaagcagcgcagacgcgggagcacgtcttccgcttcatcagcgtggtct
tctctttctggaggatcaagtcattttagtttatcagactcgacaggcagcgtctgtttc
gcggggagttctttagcaagcgcagcccttcctacaggggagccagaggattctggacct
agctcctcaaataattcaaaacgtggccgtgtgaatataaatattacatcacgttcctta
cgctcatactctaggaatcacccttaccaatttgaggccttggactactacgccccacgc
cgactaggtctcaggactaccaccaccctttccacttcctttaccaagtcagaagaacca
aaagtgaacagtgttacctttggtggagctcaagccaaagcgaacgatctgaccaccaca
agtgctagcaaagacaaaagccttacgccaagcgaccaagcagggccgaagaaggcaaaa
gggacggtctctaaaaccccaataaacaaagcccctgtgcaagcggcacaagccaagagg
aaaagcaataagaaacttgccaagtctgcttctacaaagcaatcttcatcaggttccgca
tcaccgccaaagagacgacagagtagcaaccacaaagcaactatcaaagggaagggaaag
ggccggtcatcgaccgctcgctccgattctctccgtcagaggtcaacagaaaccaccacg
ggaacgtgtgcaagtacaaggagccggcgcagctcgggcatgagtaagcgagggccaggg
ggctctggccgacaggaaggcagaaccggaggaagggatgctaacactgacgccaaccca
accaatgctcctaccgcatctgacgaatcagcacagggagccactgctgcaggatccagt
acgggggcctcggccttagccgccggcagcaaaggcgacgctgacgagtctgaagttaca
agactacaagctctcctagagtcccgaggagtgcctccccatctctttaacgctcttggt
cctcgcatgcaccaactactacaacgcagcatgggatccggagctagtaccaaagctcac
cagctattatcaggtctgcaggccatgggggacgaaagccagcaactccaggccgtgatt
gagatgtgccagctattagtcatgggtaacgaggatacactagggggattccccgtcaag
caggtggtacccgccctcataagcttactctccatggaacataactttgatatcatgaac
catgcgtgccgtgcattgacgtacatgatggaggctttaccacggtcatcttctgttgtc
atggatgctataccagtattcctcgagaaacttcaagtaatccagtgtatggatgtagct
gagcagtcattaaccgctcttgagatgctttcaagaaggcatagcaaagccatactccaa
gcaggtggactctgcgcatgcctcctgtacatcgagttcttctccataacggcccagcga
aacgccttggctgtagcagcaaactgttgccagagcatggggcctgatgagttccatctg
gtggccaactcgttacctctgctgtccgggaggctacagcaccaggataagaagtcagtg
gagagctgctgcctttgctttgcccgtctggtagataactatcagaatgatgagaaactt
ctcttgcatatagcagaacatggactgctaaccaatctgcaacaactgttggttgttaca
ccccccatcatcagcacggggacgttcatcatggtcatccggatgctatcactcatgtgt
gcaaactgcccgagcctcgctgttcagctcctcaaacaaaatattgcagaaacgataagt
taccttctgattggcgcttcagactcttcaaatctagatattgagcttgtatcaagaagc
ccccaggaactatatgaaataacttctctcatcagtgagctgatgccaagactcccccgc
gatgggttgttctctgtcgatgcttatctcaagaaggtacccaatctgataaccgaggct
gctctctggcagtggagagacgatagggggatgtggcatccttatacacgcattgataac
aggatcgttgaggccgcccaccaagcaggagaagatgaagtgactctatctactttggga
cgaacctacacaatagatttcaatgcaatgcagcagatcaatgaagatactggtactgct
agaccggtccagagaagacctaatcctgcagccggaactggctcatcttctgcttcatca
gtgactgctcctaaggaagatgctagagtggtgttcatgaaggaggacggtgagcagtca
gctgcattcatcaaatcactctttgccgttctatatgaagtctacagctcatcggctgga
cctgcagtcaggcataagtgtttgaaggccttactaagaatggtgttctttggaaaacca
gatcttctgaaagacatgctgaagaatcatgctgtatcaagtcacatagcagcgatgcta
tcatcacaagatctcaaggttgttgtaggtgcccttcagatgtctgagatactgatgcag
aagctcccagatatcttccacatctacttccgaagagaaggtgtgatgcatcaagtgaag
aaccttgccgaggctaccatcacggctgacagctcccctccagtcaaagacaagttctcg
gcctccaaggtcacagcttcagatccctcctcgtcatcgtcgtcatccaccccagcatcg
tctgcctcctccgcatcatcggcatcgtcctccgcatcatccacacataccccgtcaccc
agggatacaatcaatatcaatgtgggcttggattctgatggtgtgcctcaaggacgtctt
agcgatgccttgaagctgaagcgtgccacgaagcgaggtcctggtcgaaagagtaaccgc
tacgctagcaacgacgacacgccatcccaggggggtcacggccaccattacgatgctatc
gatacaccacctggtagactgagcgcagtatcggtgccaatgcctccttcatcaagagct
gtagggggcagcagtgggggcaggacaggggtcagcaagggcaaaggatccacaggcaag
atggtcagtggctccacctcctcacgttcttccttcctagccagcctcaacctctcccgc
tggggcaggggtgcgtccaactccccgtcctcgaccaacaccacccaaagcaatacggcc
atgggcagcgaccaccaccaccaccaccatcaccaccaccacctgcacaccgctgcgggc
cgggagatgggtctgcagaggggcggagccgggatggggtacgggtcggataggatactg
ggacatgggagtgagaacctgctaggggtgcagaaggatgccagcgggtcgcagaaggag
aaggttcgagcgtggatcaaggaacaagcctctcaatttattagtcagtacttcagccaa
acagatcaccaaggggagtcacacccggccctcacgttactcaatcagctctgtactaac
gcagacaaacttacactaaaggatgatgaaggaagtgaaatgcttgagagcatcgctcac
attctcaccaattccgatatatctgcctttgagatcctccacagtggtctagtggtcaag
ctcttagaatacatgaccaacaagagtgaccacaatcccgtttcaagggacctgaggctg
caacgctttctacatatattcctgcaatgtccagctccgggcagtcctccattcacatcg
ctggagatccccgagaatccgcctttcacatcgttagtctccaagatcaacggctgcatc
aaccatctggagcagttcccggtcaaagtccacgacctgcccggcgccggggggtcgtcc
ggcggaaccagggggtcgcaagccctcaagttcttcaacacgcaccagctgaagtgccag
ctgcagagacaccccgactgtgccaacctgagacagtggaggggtggaccggtcaagatt
gaccctctggccttggtgcaggccattgagaggtatctcatggtcaggaactatggacgg
atgagacaggacgacgaggatagtgacgatgacgcatccgatgatgagatcgatgaatcg
gttgcaacggctttctcaagctccaacaccaacatcaagcacaagcttcagttcttgatc
ggagagcaagttcttccgtataacatgacggtctaccaggcaatcaagcagtttggtagc
gcagccagtgcatcagaggaagacagagatacggatgatgagagcaacccgttaggacgg
gctggtatctggatcaaaacgcatactatatggtaccgtcccgtcccagaggctggctca
atatccactcaaaagtcgtcatcaaatagcagtacaactaccactacaaccaccactagg
aaaggcaagggaggaagctcttctaaatcatcttctaaaggaagaaaacatgatgaatta
tggatggatggtgtgtgtccagtaatacagaaagaacttgataagtacctacattgtaat
ctacctggttccgtccctatcgaagacccttcatgtgcagctatcactcttctaagagtt
ctctatggtcttagtagacattggaataatctatacccgggagctttaccgcagcaggcg
ttaggtagcagtgagtttgtgaacagcaagctatcagcgaaggctaacagacagttacag
gatcccttggtgatcatgacagggaacctcccgtcttggcttaacgcagtggcacaggca
tgcccgttcctactgccgttcgacactcgtcagctactcttctacaccacggcgtttgat
cgcgatagagccatgcaaagactgcaagacaacaatccagacatgtcaacgtccgaaaac
agcgaacgggtcgctcctagactggacaggaggaaaagaagcgtatcgagagcagatttg
ttgcgacaagccgagtccgtcatggaggacctagcaaactcaagagctgtccttgaaata
cagtacgaggatgaggttggcactggtctaggccccaccctcgagttctatgccttggta
tctagagaggtacagcgagctgaccttgatctctggagaggagattctgttcttttacca
gaccctaaaggcaagcaggctggagtgaagtacatccactcgccccatggcctcttcccg
tcaccgataggacgcaatgccaaggcttcagcagtagccaagattaagtccaagtttacc
ttcatgggacgattcattgcaaaggcgcttatggattctagaatgattgacattccactt
agcctgccattctacaagtggctcttgggacaggaggctacgttgacctcggccgacctg
cagtacatcgaccgtaccttggcccgatccttccagcagctcgaagagctcggtcagcag
aaacagaggctggttgatgacccctcccagaccgctgccagtctacagctagccctagag
tcgctgagtatagacggtagcccggtggaagagcttggattagacttcaccctacccggt
taccccaatatagaacttaagaaaggaggcaaggatatcgatgtcaccattcataatctg
gatgagtacctcaagcttgttgtacgttggaccctgaatgaaggcgtatcgaggcagttt
gaggcccttaaagatggtttccaatcggtgtttcctctctctcatctacaaagcttctac
ggtgaagagttggatcagcttttctgtggaaatcgaagtgaaccatgggacatcaagact
ttaatagaatgctgcaggcctgaccatggctatacacacgatagtcgtgccgtgaagcta
ttatttgagctgatggcatcgtatacagatggccaacagagggagtttcttcagttcgtc
actggcagccccaagctccctgtaggaggtttcaggtccttgaatcctcctctcacaatc
gtcaggaagatgttcgaaggctccgaggacccggataaattccttccctcggtgatgaca
tgtgtgaactacctaaagctacccgactatagctccagagaagtcatggcatctaagctt
tctgtagccattcgagaaggacaacagtccttccatttatcataa
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integrated database retrieval system
