Lytechinus pictus (painted urchin): 129278900
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Entry
129278900 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129278900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129278900
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129278900
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
HECT type E3
129278900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
129278900
NCBI-ProteinID:
XP_054771004
LinkDB
All DBs
Position
16:complement(27183083..27230619)
Genome browser
AA seq
1855 aa
AA seq
DB search
MHVVRRFSLVFYYYFIGKGKGRSSTARSDSLRQRSTETTTGTCASTRSRRSSGMSKRGPG
GSGRQEGRTGGRDANTDANPSNAPTASDESAQGATAAGSSTGASALAAGSKGDADESEVT
RLQALLESRGVPPHLFNALGPRMHQLLQRSMGSGASTKAHQLLSGLQAMGDESQQLQAVI
EMCQLLVMGNEDTLGGFPVKQVVPALISLLSMEHNFDIMNHACRALTYMMEALPRSSSVV
MDAIPVFLEKLQVIQCMDVAEQSLTALEMLSRRHSKAILQAGGLCACLLYIEFFSITAQR
NALAVAANCCQSMGPDEFHLVANSLPLLSGRLQHQDKKSVESCCLCFARLVDNYQNDEKL
LLLIAEHGLLTNLQQLLVVTPPIISTGTFIMVIRMLSLMCANCPSLAVQLLKQNIAETIS
YLLIGASDSSNLDIELVSRSPQELYEITSLISELMPRLPRDGLFSVDAYLKKVPNLITEA
ALWQWRDDRGMWHPYTRIDNRIVEAAHQAGEDEVTLSTLGRTYTIDFNAMQQINEDTGTA
RPVQRRPNPAAGTGSSSASSVTAPKEDARVVFMKEDGEQSAAFIKSLFAVLYEVYSSSAG
PAVRHKCLKALLRMVFFGKPDLLKDMLKNHAVSSHIAAMLSSQDLKVVVGALQMSEILMQ
KLPDIFHIYFRREGVMHQVKNLAEATITADSSPPVKDKFSASKVTASDPSSSSSSSTPAS
SASSASSASSSASSTHTPSPRDTININVGLDSDGVPQGRLSDALKLKRATKRGPGRKSNR
YASNDDTPSQGGHGHHYDAIDTPPGRLSAVSVPMPPSSRAVGGSSGGRTGVSKGKGSTGK
MVSGSTSSRSSFLASLNLSRWGRGASNSPSSTNTTQSNTAMGSDHHHHHHHHHHLHTAAG
REMGLQRGGAGMGYGSDRILGHGSENLLGVQKDASGSQKEKVRAWIKEQASQFISQYFSQ
TDHQGESHPALTLLNQLCTNADKLTLKDDEGSEMLESIAHILTNSDISAFEILHSGLVVK
LLEYMTNKSDHNPVSRDLRLQRFLHIFLQCPAPGSPPFTSLEIPENPPFTSLVSKINGCI
NHLEQFPVKVHDLPGAGGSSGGTRGSQALKFFNTHQLKCQLQRHPDCANLRQWRGGPVKI
DPLALVQAIERYLMVRNYGRMRQDDEDSDDDASDDEIDESVATAFSSSNTNIKHKLQFLI
GEQVLPYNMTVYQAIKQFGSAASASEEDRDTDDESNPLGRAGIWIKTHTIWYRPVPEAGS
ISTQKSSSSNSSTTTTTTTTRKGKGGSSSKSSSKGRKHDELWMDGVCPVIQKELDKYLHC
NLPGSVPIEDPSCAAITLLRVLYGLSRHWNNLYPGALPQQALGSSEFVNSKLSAKANRQL
QDPLVIMTGNLPSWLNAVAQACPFLLPFDTRQLLFYTTAFDRDRAMQRLQDNNPDMSTSE
NSERVAPRLDRRKRSVSRADLLRQAESVMEDLANSRAVLEIQYEDEVGTGLGPTLEFYAL
VSREVQRADLDLWRGDSVLLPDPKGKQAGVKYIHSPHGLFPSPIGRNAKASAVAKIKSKF
TFMGRFIAKALMDSRMIDIPLSLPFYKWLLGQEATLTSADLQYIDRTLARSFQQLEELGQ
QKQRLVDDPSQTAASLQLALESLSIDGSPVEELGLDFTLPGYPNIELKKGGKDIDVTIHN
LDEYLKLVVRWTLNEGVSRQFEALKDGFQSVFPLSHLQSFYGEELDQLFCGNRSEPWDIK
TLIECCRPDHGYTHDSRGVKLLFELMASYTDGQQREFLQFVTGSPKLPVGGFRSLNPPLT
IVRKMFEGSEDPDKFLPSVMTCVNYLKLPDYSSREVMASKLSIAIREGQQSFHLS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtagtaaggcgtttttctcttgttttttattattattttatagggaagggaaag
ggccggtcatcgaccgctcgctccgattctctccgtcagaggtcaacagaaaccaccacg
ggaacgtgtgcaagtacaaggagccggcgcagctcgggcatgagtaagcgagggccaggg
ggctctggccgacaggaaggcagaaccggaggaagggatgctaacactgacgccaaccca
tccaatgctcctaccgcatctgacgaatcagcacagggagccactgctgcaggatccagt
acaggggcctcggccttggccgccggcagcaaaggcgacgctgacgagtctgaagttaca
agactacaagctctcctagagtcccgaggagtgcctccccatctctttaacgctcttggt
cctcgcatgcaccaactactgcaacgcagcatgggatccggagctagtaccaaagctcac
cagctattatcaggcctgcaggccatgggtgacgaaagccaacaactacaggccgtgatc
gagatgtgtcagctattagtcatgggtaacgaggatacactagggggattccccgtcaag
caggtggtacccgccctcataagcttactctcgatggaacataactttgatatcatgaac
catgcgtgccgtgcattgacgtacatgatggaggctttaccacggtcatcttcggttgtc
atggatgctataccagtattcctcgagaaacttcaagtaatccagtgtatggatgtagct
gagcagtcattaaccgctcttgagatgctttcaaggaggcacagcaaagccatactccaa
gcaggtggactctgcgcatgcctcctgtacatcgagttcttctccataacggcccagcga
aacgccttggctgtagcagcaaactgttgccagagcatggggcctgatgagttccatctg
gtggccaactcgttacccctactgtctgggaggctacagcaccaggataagaagtcagtg
gagagctgttgcctgtgctttgcccgtctggtagataattatcagaatgatgagaagctt
ctcttgcttatagcagaacatggactgcttactaatctgcaacaactgttggtcgtcaca
ccccccatcatcagcacggggacgttcatcatggtcattcggatgctatcactcatgtgt
gcaaactgcccgagcctcgctgttcagctcctcaaacaaaatattgcggaaacgataagt
taccttctgattggcgcatcagactcttcaaatctagacattgagcttgtatcaagaagc
ccccaggaactatatgaaataacttctctcatcagtgagctgatgccaagactcccccgc
gatgggttgttctctgtcgatgcctacctcaagaaggtacccaatctgattactgaggct
gccctctggcagtggagagacgatagggggatgtggcatccttatacacgcattgataac
aggatcgtcgaggccgcccatcaagcaggagaagatgaagtgactctatcgactttggga
cgaacctacacaatagatttcaatgcaatgcagcagattaatgaagataccggtactgct
agaccggtccagagaagacctaatcctgcagccggaactggctcatcttctgcttcatca
gtgactgctcctaaggaagatgctagagtagtgttcatgaaggaggacggtgagcagtca
gctgcattcatcaaatcactctttgccgttctatatgaagtctacagctcatcggctgga
cctgcagtcaggcataagtgtttgaaggccttactaagaatggtgttctttggaaaacca
gatcttctgaaagatatgctaaagaatcatgctgtatcaagtcacatagcagcgatgcta
tcatcacaagatctcaaggttgttgtaggtgcccttcagatgtctgagatactgatgcag
aagctcccagatatcttccacatctacttccgaagagaaggtgtgatgcatcaagtgaag
aaccttgccgaggctaccatcacggctgacagttcccctccagtcaaagacaagttctcg
gcctccaaggtcacagcttcggatccctcctcgtcatcgtcgtcatccaccccagcatcg
tctgcctcctctgcgtcatcggcgtcgtcctccgcatcatccacacataccccgtcaccc
agggatacaatcaatatcaatgtgggcttggattctgatggtgtgcctcaaggacgtctt
agcgatgccttgaagctgaagcgtgccacgaagcgaggtcctggtcgaaagagtaaccgc
tacgctagcaacgacgacacgccatcccagggaggtcacggccaccattacgatgctatc
gacacaccaccgggtagactgagcgcagtatcggtgccaatgcctccttcatcaagagct
gtagggggtagcagtgggggcaggacaggggtcagcaagggcaaaggatccacaggcaag
atggtcagtggctcgacctcctcacgttcttccttcctagccagcctcaacctctcccgc
tggggcaggggtgcgtccaactccccttcctccaccaacactacccaaagcaatacggcc
atgggcagcgaccaccaccaccaccaccatcaccaccaccacctgcacaccgctgcgggc
cgggagatgggtctgcagaggggcggagccgggatggggtacgggtcggacaggatactg
ggacacgggagtgagaacctgctaggggtgcagaaggatgccagcgggtcgcagaaggag
aaggttcgagcgtggatcaaggaacaagcctctcaatttattagtcagtacttcagccaa
acagatcaccaaggggagtcacacccggccctcacgttactcaatcagctctgtactaac
gcagacaaacttacactaaaggatgatgaaggaagtgaaatgcttgagagcatcgctcac
attctcaccaattccgatatatctgcctttgagatcctccacagtggtctagtggtcaag
ctgttagaatacatgaccaacaagagtgaccacaatcccgtttcaagggacctgaggctg
caacgctttctacatatattcctgcaatgtccagctccgggcagtcctccattcacatcg
ctggagatccctgagaatccgcctttcacatcgctcgtctccaagatcaacggctgcatc
aaccatctggagcagttcccggtcaaagttcacgacctgcccggcgccggggggtcgtcc
ggtggaaccagagggtcgcaagccctcaagttcttcaacacgcaccagctgaagtgccag
ctacagagacaccccgactgtgccaacctgagacagtggaggggtggaccggtcaagatt
gaccctctggccttggtgcaggccattgagaggtatctcatggtcaggaactatggccgg
atgagacaggacgacgaggatagtgacgatgacgcatctgatgatgagatcgatgaatcg
gttgcgacggctttctcaagctccaacaccaacatcaagcacaagcttcagttcttgatc
ggagagcaagttcttccatataacatgacggtctaccaggcaatcaagcagtttggtagc
gctgccagcgcatcagaggaagacagagatacggatgatgaaagcaacccgttaggacgg
gctggtatctggatcaaaacgcatactatatggtaccgtcctgtcccagaggctggctca
atatccactcaaaagtcgtcgtcatcaaatagcagtacaactaccaccacaaccaccact
aggaaaggcaagggaggaagctcttccaaatcatcttctaaaggaagaaaacatgatgaa
ttatggatggatggtgtgtgcccagtaatacagaaagaacttgataagtacctacattgt
aatctacctggttccgtccctatcgaagacccttcatgtgcagctatcactctgctaaga
gttctctatggtcttagtagacattggaataatctatacccgggagctttaccgcagcag
gcgttaggtagcagtgagtttgtgaacagcaagctatcagcgaaggctaacagacagtta
caggatccattggtgatcatgacagggaacctcccgtcttggcttaatgcggttgcacag
gcatgcccgttcctactgccgttcgacactcgtcagctacttttctacaccacggccttt
gatcgcgatagggccatgcaaaggctgcaagacaacaatccagacatgtcaacgtccgaa
aacagcgaacgggtcgctcccaggctggacaggaggaaaagaagcgtatcgagagcagat
ttgttgcgacaggccgagtccgtcatggaggacctagcaaactcaagagctgtccttgaa
atacagtatgaggatgaggttggtactggtctaggccccaccctcgagttctatgccttg
gtatcgagagaggtacagcgagctgatcttgatctgtggagaggagattctgttctttta
ccagaccctaaaggcaagcaagctggagtgaagtacatccactcgccccatggcctcttc
ccgtcaccaataggacgcaatgccaaggcttcagcagtagccaagattaagtccaagttt
accttcatgggacgattcattgcaaaggcgcttatggattctagaatgattgacattcca
cttagcctgccattctacaagtggctcttgggacaggaggccactttgacctcggccgac
ctgcagtacatcgaccgcaccttggcccgatccttccagcagctcgaagagctcggtcaa
cagaaacagaggctggttgatgacccctcccagaccgctgccagcctacagctagccctg
gagtcactgagtatagacggtagcccggtggaagagcttggattagacttcactctaccc
ggttaccccaatatagaacttaagaaaggaggcaaggatatcgatgtcaccattcataat
ctagatgagtacctcaagcttgttgtacgttggaccctgaatgaaggcgtatcaaggcag
tttgaggcccttaaagatggtttccaatcggtgtttcctctctctcatctacaaagcttc
tacggtgaagagttggatcagcttttctgtgggaatcgaagtgaaccatgggacatcaag
actttaatagaatgctgcaggcctgaccatggctatacacacgatagtcgtggcgtgaag
ctattatttgagctgatggcatcgtatacagatggccaacagagggagtttcttcagttc
gtcactggcagccccaagctccctgtaggaggtttcaggtccttgaatcctcctctcaca
atcgtcaggaagatgttcgaaggctccgaggacccggataaattccttccctctgtgatg
acatgtgtgaactacctaaagctacccgactatagctccagagaagtcatggcatctaag
ctttctatagccattcgagaaggacaacagtccttccatttatcataa
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integrated database retrieval system
