Lytechinus pictus (painted urchin): 129278937
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Entry
129278937 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpic01002
]
129278937
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129278937
Enzymes [BR:
lpic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129278937
Peptidases and inhibitors [BR:
lpic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129278937
Ubiquitin system [BR:
lpic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129278937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129278937
NCBI-ProteinID:
XP_054771039
LinkDB
All DBs
Position
16:29860657..29908526
Genome browser
AA seq
1753 aa
AA seq
DB search
MTLGMKGTPTGAGDTAPETSPVVPPHPSPSNPPANHPPEPTEGGSDGGDENIDTEEPPFP
VESLNRLDEMINKPRWVIPVLPKGELEVLLEAAIELSKKNLDIRSESCQRFFRDGLTISF
TKILTDEAVSGWKFEIHRCIMKNTEKLIELCVSKLSQDWFPLLELLAMALNPLCKFHVFN
GSRQSETVPMGSQLNNNDIFARPPDIRNPKGWLVDLLNRFGALGGFDILQERFLDESQSL
NVPINPWGQCYELITQHTVQTHFMPIVDRVVAYLDGLSDDELKKESKNEARNDALSSIIK
ALRNLVSKVPNQEEKIKSLEMFRLKMILRLLQISSFNGKMKHSRVLVISXVTYYTHKQTG
MDEEEYLTAERMAEWIQENKVLSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMEDLDNI
WAAQVGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFQESWATASTKQREKLLELIRRL
AEDDKDGLMAHKVLSLLWTLAHQQDVPTDIMDQALHAHTKILDYSCSQVRPNWTCSRLSF
LFLKQDGVLTTGECLCEDALLEGHLGITRELLAFMTSEKKFQVGSKKDGCQLIKELLDDF
LFPASKIVVQTLKNGAETPLDPVIPVCTTPPTINAAFDLLVALCMNCVPNLKLVTDTLTD
MYYSGNDAPLTEWEYLPPVGPRPNKGFVGLKNAGATCYMNSVLQQIYMVPEIRRAVLSAE
GAIIDTEDDFYNDEKQDNESNIDIVESEVGSSVIEEGPPMSKQEETKEYNLGVLKHVQAI
FGHLAESKLQYYVPRGFWKQFKLAGEPVNLREQHDALEFFNSLVDSLDEALKAHGANAVF
AKVLGGSYADQMICKDCPHRYSRESMFTTLNVDIRNNQNLLDSLEQFVKGDLLEGDNAYR
CEKCNKKVDTVKRMCIKRLPKVLAIQLKRFDYDWERECAIKFNDYFEFPKEFDMDPYTVE
GLAKIEGEIIQDDERENSEEEEEGGSRSTKYRLVGVVVHSGQASGGHYYSYILHRNGGDG
NQQGKWYKFDDGEVTECRMEDDEEMKNQCFGGEFMGEVFDHMLKRMSYRRQKRWWNAYIL
LYERMDNNKKELDKEFEGLTIAPKMLNKMPPAIQRSVRKQNIQFMHSRMQYSPEYFQFVR
KLVTCNAGLFNPPQGQELQLTTESEELAMLSIQLASRFLFTVGLHTKKTLRGPANDWYDA
LYILLRVSKMVRRWFAQNMLFSEPARFSEYLLDCPSSEVRNAFAKVIVILAHFSQQDGAF
QPSLQGSVSPDSSTTLSNHLLRAVLDLLKKEVSEHGRHLTQYFQLFQMYANLGVVERTQL
LKLNVPATFMLVALDEGPGPPIKYQYAELSKLYSVVSLLIRCCDVSSRTKSSMAGANPLP
NPHGDHMCSKPIMAIQPQVADLLFSRGAYIKKLIEDCNNSEETPKLLKFCSWENPNFTLV
VLGELLWQVAYSYTYELRPYMDLLLQILLLQDSWQNHRILNALKGIPDDRDGLFDTIQRS
KTHYQKRAYQCIKCMVALFSNCEAAHRLLQSHGDLKRKWNWAVEWLGDELDRRPYSGNTQ
YTYNSWSPPAQSNEISNGYFLERSHSARITLEKACQLCPEEEPDEPEMMDEHEGSDPQDE
APVPSTYPQSLPHLQTAPNNQQQQQPSPPPSSSSSTSSSQQQSQQQPPVTAQNSQMQPQV
PNNQQPAQNAPPSTGSQVGSLHKHPNTINNTLHSPEQGGTTSPTTSTPGSNPQTSPLEGQ
LDEKTEGGNNKET
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgactctagggatgaaaggcacacccaccggggcaggggacaccgccccagaaacctca
ccagttgttccgccacacccatcgccatctaatccaccagccaaccatccgcctgagccg
acagaaggaggtagcgatggtggtgatgagaacattgatacggaggagcctccattccct
gtcgagtcgctgaatcgtctggatgagatgatcaacaaaccaagatgggtcatccctgtt
ctgcctaaaggagagcttgaggtccttctcgaggctgctattgaactcagcaagaaaaac
cttgatattcgcagtgaatcatgccagaggttcttcagagatgggttaacaatttccttc
actaaaatcctcactgatgaagccgttagtggatggaagtttgaaatccatcggtgcatt
atgaagaatacagagaaactgatagagctgtgtgtgagcaaactatctcaggactggttt
cccctcctagaactactagctatggctcttaatccactctgcaagttccatgtgtttaac
ggctcaaggcagtccgaaacagtccccatgggctcccagctgaacaataacgacatcttt
gcaagacccccagacatcagaaatccaaagggttggttggtagacctgttgaatcggttt
ggagcactcggtggatttgatattcttcaggaaagattcttagatgaaagccaatctctc
aacgtaccaattaatccctggggtcagtgctatgagcttatcactcaacacactgtacag
acacatttcatgcctatagtggatcgtgttgtggcatacttggatggtctttcagatgat
gaactaaagaaggagtccaagaacgaagcaaggaacgatgctctttcatctatcataaag
gcactgaggaatcttgtctccaaggttcccaaccaagaggagaaaatcaagagtctagag
atgttcagactcaagatgatcttgaggctactacaaatatcgtctttcaacgggaagatg
aagcactcacgagtcctggtcataagtnncgtgacatactacacgcacaaacagacaggc
atggacgaagaagagtaccttacagcggagaggatggctgagtggatccaagagaataaa
gtgttgagtattgttctacgagacagtcttcatcagcctcagtatgttgagaagctggag
aagattcttagatttgtcatcaaagaaaaggccctcaccatggaagacttggacaacatc
tgggctgcacaggttgggaaacatgaagcaattgttaagaatgtccatgacttactagcc
aagcttgcctgggacttctctcctgaacaactagatcatctctttgattgctttcaggag
agttgggccaccgccagcaccaaacagagggagaagctactggagctaatccgtagacta
gctgaagatgacaaggatggtctcatggcccataaggtcctgtccctactctggaccctg
gcccaccaacaggatgtccctacagacatcatggaccaggcgctacatgcccacaccaag
atcctggactatagctgttcgcaggtaagaccaaattggacttgtagcaggttatcattc
ttatttctcaaacaggatggtgtattgacaacaggagagtgtctatgtgaagacgcgtta
ttagagggtcatctaggtattacaagagaactcttggctttcatgacgagcgagaagaag
ttccaggttggatctaagaaagatggctgccagttaattaaagaattactggatgacttc
ctgttcccggcatcaaagatcgtcgttcagacgttaaagaacggagccgagacgccgctg
gatcccgtcattccggtgtgcacgaccccacccacgataaacgctgctttcgatctactg
gtggcgctgtgcatgaactgtgtcccaaacctcaagcttgtcacggatacgctcactgac
atgtactattcaggtaatgatgcacccttgacagaatgggagtatctgccgcctgtcggt
ccaagacctaataaaggcttcgtgggactaaagaatgctggagcaacctgctatatgaac
tctgtcttacaacagatatacatggttcccgagattagacgagcagttctctcagcagag
ggcgctatcatagacacggaagatgatttctacaatgacgagaaacaagataatgagagt
aatatagatattgttgaatccgaggtgggtagctcagtcatcgaggaaggaccaccgatg
agcaagcaagaagagaccaaagaatacaacctgggtgtcctgaagcacgtccaagccatc
tttggccacttggcagagagcaaactccagtactatgtacctaggggattctggaagcaa
ttcaaattggcgggtgaacctgtgaatcttcgagagcagcacgatgccttagagttcttc
aacagtctggtggacagtctggatgaagccctcaaggctcacggagccaatgccgtcttt
gccaaagtactcggtggctcttacgctgatcaaatgatatgcaaagattgccctcatagg
tattccagagagtcgatgtttaccaccttgaatgtggacattcgcaacaatcaaaaccta
ttagattcactggaacaatttgtcaagggagacctactagaaggggacaatgcataccga
tgtgaaaagtgcaacaaaaaggtggacactgtaaaacgtatgtgtatcaagaggctaccg
aaggtccttgctattcagctgaagagattcgactacgactgggaacgggaatgtgcaata
aagttcaatgactattttgagtttcccaaagaatttgacatggatccttacacagtggag
ggactagcgaaaattgaaggtgagatcatccaggatgatgagagggagaatagtgaggaa
gaagaggaaggaggatcaagaagtaccaagtatagattagtaggagtcgttgtacatagc
ggacaagccagtggaggacactattattcatacattctacataggaacggtggtgacggg
aaccagcagggtaaatggtataagtttgatgatggtgaagtgacggagtgcaggatggaa
gacgatgaggagatgaagaaccaatgttttgggggagagtttatgggtgaggtctttgat
cacatgctaaaaaggatgtcatacaggagacagaagagatggtggaatgcctacatctta
ctctatgaaaggatggataataacaagaaggaacttgacaaggagtttgaaggactcaca
atagcccctaagatgctgaacaagatgcccccggccatccagcgcagtgtccgcaagcag
aacatacagttcatgcatagccgcatgcagtacagtccagaatactttcagtttgtacgc
aagctggtcacatgcaatgcagggctcttcaatccaccacagggtcaggagctgcagctg
acaaccgagtctgaggagctagcaatgctcagtattcagctagcgtcaaggtttctcttc
acagtaggtctccatacaaagaaaacactcagagggccggccaacgactggtatgacgcc
ctctatatcctcctaagggtcagtaagatggtacggaggtggtttgcacaaaacatgctc
ttctcagaaccagccaggttctcggagtatctcctagattgtccaagctcagaggtgagg
aatgcctttgcaaaagtaatcgtcatcctggcccacttctctcagcaagatggagcattt
caaccatccttacaagggtcggtgtcacctgacagctcaacaacgctaagcaatcacctg
ttgagggcggtattagatctattaaagaaggaagtgtcggaacacggcagacacctgacg
cagtacttccaactcttccagatgtatgctaatctaggagttgttgagaggacacaactg
ctgaagttgaacgtccctgcgaccttcatgttagtagccctagatgagggaccgggtcct
cctatcaagtaccagtatgctgaactgagtaagctctactcggtcgtctctcttcttatc
agatgctgtgatgtctcgtccaggacgaagtcatccatggcgggtgccaatcctctaccc
aaccctcatggtgatcacatgtgctccaagcctatcatggctattcagcctcaggtagca
gatcttctcttctcacgcggggcctacatcaagaaactcattgaggattgtaataactcg
gaagagacgcccaaacttctcaaattttgcagctgggagaatccaaacttcactttggtt
gtcctaggtgaactcctgtggcaggttgcctactcctacacctacgagctcagaccttac
atggaccttctactacagatcctactcctgcaggattcctggcaaaaccatcgcatcctc
aacgcccttaaaggaatcccagatgatcgggacggcctcttcgacacgatccaacgttcg
aagacgcactatcagaagcgtgcgtaccagtgcatcaagtgcatggtggcgctgttcagt
aattgcgaggcagcgcacagattgcttcagtcacatggtgatctgaagaggaagtggaac
tgggctgtggaatggcttggagatgaattagataggagaccgtactctggcaacacgcag
tacacctacaacagctggtcaccaccagctcaaagcaatgagatatccaatggatacttc
ctagagaggtcgcacagcgctcgtattacgctagagaaggcttgccagctatgtcctgaa
gaggaaccggatgaacccgagatgatggatgaacacgagggttcggatccccaggacgaa
gcccccgtgccatcaacgtacccacagtccctaccgcacctacagacggctcccaacaac
cagcaacagcagcaacccagtccaccaccttcctcatcctcctcaacatcgtcatcgcag
caacagtcgcagcaacagccaccagtcacagcacagaatagccagatgcagccacaagtg
cccaacaaccagcaaccggcccaaaacgctcctccaagcacgggcagccaggttgggagt
cttcacaagcacccaaacaccatcaacaacacccttcatagtccggagcagggcggcacc
accagccccaccacctccactcctggctctaacccccagacgagcccactagaggggcaa
ctagatgagaagacggaagggggcaacaacaaggagacttag
DBGET
integrated database retrieval system
