Lytechinus pictus (painted urchin): 129279325
Help
Entry
129279325 CDS
T09066
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03410
Base excision repair
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129279325
03410 Base excision repair
129279325
03420 Nucleotide excision repair
129279325
03430 Mismatch repair
129279325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129279325
03036 Chromosome and associated proteins [BR:
lpic03036
]
129279325
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129279325
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129279325
DNA Replication Termination Factors
ELG1-RFC complex
129279325
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129279325
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129279325
Check point factors
HRAD17(Rad24)-RFC complex
129279325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_22
AAA_30
AAA_assoc_2
AAA_lid_RFC1
AAA_24
AAA_16
AAA_19
AAA_11
MCM
SLFN-g3_helicase
DNAX_ATPase_lid
RuvB_N
DUF815
ATPase_2
AAA_2
ResIII
Mg_chelatase
AAA_18
AAA_7
AAA_5
Histone_HNS_N
Kinesin
Gp44_lid
bpMoxR
Motif
Other DBs
NCBI-GeneID:
129279325
NCBI-ProteinID:
XP_054771388
LinkDB
All DBs
Position
16:30720548..30745631
Genome browser
AA seq
355 aa
AA seq
DB search
MDAFLKGGSFKSKAATTSTGGSTKQRQVPWVEKYRPKTVDEVAYQDEVVAVLKKSLQGAD
LPNMLFYGPPGTGKTSTILAASRELFGHDMYRSRVLELNASDERGIQVVRDKVKKFAQTA
AGGVRPDGKPCPPFKIIILDEADSMTNDAQAALRRTMEKQSKNTKFCLICNYISRIIEPL
TSRCSKFRFKPLSKPIQGKKLREICEAENITCSDEALEAILKLSEGDMRKSITFLQSAHR
LQREDGILVDDIYEIAGVIPDRTIDNLIQACYGGSYEKLDENVQQLLQDGYSASQVVNQV
FDVIVERGELTNKQKSAIAERLAVIDKRLCDGADEGLQIMDLFTLTMDQFCTVQN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttcttaaaggaggaagctttaaatccaaggctgcaactacctccactgga
gggtccaccaaacaaagacaagtgccatgggttgaaaaatatcggccaaagacagttgat
gaggtggcgtatcaagatgaagttgttgctgttcttaaaaaatccttacaaggagcagat
ctacctaacatgttgttctatgggccccctggtacaggcaaaacttccaccatcctagct
gcatcgagagagctctttggacatgacatgtatcgaagccgtgttctagaactgaatgcc
tcagatgaacgtggtatccaggtggtacgagacaaggtcaagaaatttgctcagactgcg
gcgggtggagtcagaccagatgggaaaccatgccctcctttcaagatcatcatattagat
gaagctgattcaatgaccaatgacgctcaggctgcccttaggagaacaatggagaagcaa
tcaaagaatacaaaattttgtctcatctgtaattatatcagcaggattatagagccgctg
acgtctcgttgctccaagtttcggtttaagcctctcagtaaacccatccaggggaagaaa
ctaagggaaatctgtgaagctgagaacatcacatgtagtgacgaggctttggaagccatt
ttgaaattatcggaaggagacatgaggaaatccatcaccttccttcagagcgctcatcgt
cttcaacgagaggatggcatcctggttgatgatatctatgagattgctggggttatccca
gatagaaccatagataatctcattcaggcctgctatggtggatcctatgaaaagctggat
gagaatgtccaacagctgctccaagatggctactcagcatctcaggttgtcaaccaggtt
ttcgacgtcatagtggaaagaggagagctcactaataaacagaagtcggccatcgccgag
cggcttgctgtcatcgacaaacgactgtgcgatggagcagacgaaggcctgcaaatcatg
gatctgttcacactgaccatggatcaattctgcactgtgcagaactag
DBGET
integrated database retrieval system
